Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1251 |
Symbol | |
ID | 6110175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1383232 |
End bp | 1383969 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641621021 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001748125 |
Protein GI | 170720437 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.116745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0613053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACG GGATTCTCGG ACAAGACCCG CGCCTACCGC TTTATCAGCA AGTACGGGAA GAAATCCTCG CCAGGATCGC CGCCGGGCAA TGGCTACCGG GTGCACCGAT ACCTACTGAA ACGGAGCTGA CCCGCCTCTA CGGTGTCGCC ATCGGCACTG TGCGCAAGGC GGTCGACACC TTGGTCAATG AAGGTCTGTT GTTGCGCAGC CAGGGCCGAG GCACCTTCGT GAGACGCCCT GACTTCGAGG GTTCACTGTT TCGGTTTTTC CGACAGGTGG ATTCGACCGG CCAGCGCCTG GTGCCGATCA GCCGCATACT GGACAGGCAG TTGCGCGAGC CGCCGGCTGA AGTCAGCGCA GGCCTCGGGC TGGACAACGC AGAACAGGTC ATCTGGCTCG AGCGCCTGCG CCTGGTAGAT GGCCGCCCGC TGTTCCATGA GCAGATCTGG CTACCGGCTG CGCGTTTCAT GGCCCTGCTG GATATTGATG CAGACGCCTT CGGCGACCTG CTCTACCCTT TCTACGAGTC CCACTGTGGC CAGTGCGTAG CCTCGGCCAA GGAAACACTG ACAGTCGGTA CTGCCGATTC CGCCAGTGCC GGCCACCTGG CAATCAGGGA AGGTGCGCCC GTGGTGGTCA TTCAGCGCAC GGCCCTGGGT TACGACCGCA ACCCGCTGGA GTACCGCGTT TCCCAGGCAG CAGCAGAAGG CTTCCGCTAC CAGATCGATA TTTCGTGA
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Protein sequence | MSNGILGQDP RLPLYQQVRE EILARIAAGQ WLPGAPIPTE TELTRLYGVA IGTVRKAVDT LVNEGLLLRS QGRGTFVRRP DFEGSLFRFF RQVDSTGQRL VPISRILDRQ LREPPAEVSA GLGLDNAEQV IWLERLRLVD GRPLFHEQIW LPAARFMALL DIDADAFGDL LYPFYESHCG QCVASAKETL TVGTADSASA GHLAIREGAP VVVIQRTALG YDRNPLEYRV SQAAAEGFRY QIDIS
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