Gene PputW619_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1228 
Symbol 
ID6110152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1359859 
End bp1360392 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID641620998 
ProductNLP/P60 protein 
Protein accessionYP_001748102 
Protein GI170720414 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.771322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATGA TGGCGCGCTT CGCACTCCTT TCCCTGGTGG CATTGCTTGC CGCCTGCTCC 
GGCCGTGCCC CGGCACCGGC GCCTGTGGTA CAGCCACAGA TCTCGTACAG CCAACCCTCT
GCGTCCCCGG TTGCCGACGA CGTGCTGATC CGCGCAATTG GCCTGGTGGG TACGCCGTAT
CGCTGGGGGG GTAACACACC CGATTCCGGT TTCGATTGCA GTGGCTTGAT CAACTACGTC
TACCGGGATG CGGCGGGTAT CAGCCTGCCT CGCTCCACGC GAGAAATGAT CGTCATGCGT
GCTCCGACCG TGGATGTCCA CTCACTGCAG TCGGGCGACC TGGTGTTCTT CGCTACCAGC
GGTGGCTCGC AGGTGAGCCA CGCCGGTATC TACGTGGGCG AAGGGCGTTT CGTGCATGCT
CCGTCCACCG GCGGCACTGT ACGTCTGGAT TACCTGTCCA ACAGTTACTG GTCCAAGGCC
TACCTGCAGG CAAAACGGGT GATCACTCAA GGGCATCTGG CGCATAACCC TTGA
 
Protein sequence
MVMMARFALL SLVALLAACS GRAPAPAPVV QPQISYSQPS ASPVADDVLI RAIGLVGTPY 
RWGGNTPDSG FDCSGLINYV YRDAAGISLP RSTREMIVMR APTVDVHSLQ SGDLVFFATS
GGSQVSHAGI YVGEGRFVHA PSTGGTVRLD YLSNSYWSKA YLQAKRVITQ GHLAHNP