Gene PputW619_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1193 
Symbol 
ID6110117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1325922 
End bp1326620 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID641620963 
Producttwo component transcriptional regulator 
Protein accessionYP_001748067 
Protein GI170720379 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0519929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAC CCGTACCCCG CATCCTGATC GTCGAAGACG ACCAGCGCCT CGCCGAGCTT 
ACGGCTGAAT ACTTGCAGGC CAACGGTTTC GATGTGGCAG TGGAGGGCGA TGGTGCGCGC
GCCGCCCGGC GTATCGTCGA CAGCCAGCCA GACATGGTCA TCCTCGACCT GATGCTGCCC
GGTGAAGACG GCCTGAGCAT CTGCCGCCGC GTACGTGGCC AGTACGCAGG GCCCATCCTC
ATGCTCACTG CCCGCAGCGA CGAGCTCGAC CAGGTCCAGG GCCTGGACCT TGGCGCTGAC
GATTACGTGT GCAAGCCGGT GCGCCCACGC TTGCTGTTGG CACGCATCCA GGCCCTGCTG
CGGCGCAGCG AGCCGGCACA AGGCAAAACC CAAGAGCTGG CCTTTGGTGC CCTGAGCATC
GACAACCGCC TGCGCGAAGC CCGGCTCGGC GAACAGCTGA TCGAACTTAC CGGTGCCGAG
TTCGACCTGC TCTGGCTGCT GGCCAGCAAC GCCGGGCGGG TACTGTCGCG TGAGCAGATC
TTCACCGCCT TGCGCGGTGT CGGTTACGAC GGTCAGGACC GCTCCATCGA CGTGCGCATC
TCCAAGATCC GCCCCAAGAT CGGCGACGAT CCGATCCACC CCCGTCTTAT CAAGACCCTG
CGCAGCAAAG GCTACCTGTT CGTCGGCGAT GCACCATGA
 
Protein sequence
MDQPVPRILI VEDDQRLAEL TAEYLQANGF DVAVEGDGAR AARRIVDSQP DMVILDLMLP 
GEDGLSICRR VRGQYAGPIL MLTARSDELD QVQGLDLGAD DYVCKPVRPR LLLARIQALL
RRSEPAQGKT QELAFGALSI DNRLREARLG EQLIELTGAE FDLLWLLASN AGRVLSREQI
FTALRGVGYD GQDRSIDVRI SKIRPKIGDD PIHPRLIKTL RSKGYLFVGD AP