| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1186 |
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| Symbol | |
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| ID | 6110110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1314911 |
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| End bp | 1315438 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641620956 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001748060 |
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| Protein GI | 170720372 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00496459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.115693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGC TTTTCCTTAG CGTGAACGAC ACGCTCTACC GCAGCTGCAT CTGGGTCGCC
GGCCTGTCGA TCCTGGCCAT GTCGCTGATC ATTCCCTGGG GCATCTTTGC ACGCTACGTG
CTGGGTACGG GCTCCAACTG GCCTGAGCCG GTGTCGATCC TGCTGATGGT GGTGTTCACC
TTCGTCGGTG CCGCCGCCAG CTACCGGGCC GGCGCGCACA TGGCGGTGGG GATGATCACC
GACCGCTTGC CACCGCTGCA GCGCCAACTG GTTGCACTGC TGGTGCAGCT GCTGATGGTC
CTGGTGTGCG TGTTCATGAC TTACTACGGC ATCAAGCTGT GTATCACCAC GTGGAACCAG
TCGCTGGCTT CTTTGCCTGG GGTACGGGTG GGCATGACCT ACGCGCCGAT CCCGGTCGGT
GGCGTGCTGA CACTGATTTT TGTACTGGAA AAACTCCTGC TGGGCGATCA GAGCAACCGC
AAGGCGGTTC GTTACGATCT GGCGGAAGAA AACGAAGGAG CTGCGTAA
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| Protein sequence | MKSLFLSVND TLYRSCIWVA GLSILAMSLI IPWGIFARYV LGTGSNWPEP VSILLMVVFT
FVGAAASYRA GAHMAVGMIT DRLPPLQRQL VALLVQLLMV LVCVFMTYYG IKLCITTWNQ
SLASLPGVRV GMTYAPIPVG GVLTLIFVLE KLLLGDQSNR KAVRYDLAEE NEGAA
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