Gene PputW619_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1170 
Symbol 
ID6110089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1290341 
End bp1291558 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content62% 
IMG OID641620935 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_001748044 
Protein GI170720356 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.364137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00137418 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAACG CCATCAGCAC CGATATCGCC ACTATCGGCC GCATCAGTGC GGTGCCCGCC 
ATCCTTCAGG TCATCTGCGA ATCCAGCGGC ATGCGTTTCG CCGCCGTGGC ACGGGTTACC
GAATGCAACT GGACTGCCTG CGCCGTACTC GACAACCTGG GCTTTGGTCT TGAGGTGGGC
GGAGAGCTTG AGGTGGCAAC CACCCTGTGC CATGAGATTC GCAGCTCTCA CCAGACCATC
GTGATCGACA AAGCCAGCGA AGATGAGCGC TACTGCCAGC ACCAGACGCC GCAGCGCTAT
CGCTTCGAAA GCTACATATC CGTGCCGGTG TTCCGAACAG ATGGCCGCTT CTTCGGCACC
ATCTGTGCCC TGGACCCGAA TCCGGCCTCG CTCAAAGGCC AAGCGATCCA GCCCATGATG
GAGTCATTCG CCCGCTTGCT GGCCATCCAG ATCGAGAGTG AGGAGAGCGT CCAGCACACC
GAGCGCGCCC TGCGCGAGGA ACGGGCGATG GCTGAAGTGC GCGAACAGTT CATCGCAGTG
CTCGGCCATG ATCTGCGCAA TCCGCTGTTC GCCATCACCG CAGGCGCCGA ACTGTTGACT
CAGCGCCTGG ACGACGACAA GAACCGCGCG ATCGCCCGCC ACATTCACAC TTGCGGGCAG
CGGGCTTCAC AGCTGGTGCG CGACGTGCTG GATTTCGCCC GAGGCCGGCT CGGCAGCGGC
ATCCCATTGA ACCTGCAGCC CTGCCCGGAC CTGTCCGAAG GCCTCATGCA TGTCGCTGCA
GAACTGCAGC ACGTACACCC ACGGCGGCAG ATCCTCCTTC AGGTCGATGA TATCGGCGGC
CTGTACTGTG ACCGCGAACG GGTGACCCAG CTACTCTCCA ACCTTATCGC CAACGCGCTG
ACCCATGGTG CGCCTGACGG GCCAGTGACG GTCAGGGCGG CGATTGCCGA TGAGGAGTTC
GTGCTTAGCG TGCACAACAA CGGGCACCCC ATCGCCCCAC AAACCCTGAA CCAATTGTTC
CAGCCCTTCA CCAGGCCGCT GTCTGCGGCG CCAAGACAGG GGCTTGGCCT TGGCCTTTAT
ATAGCCAATC AGATTGCCCT GGCCCATGGC GGACGCATGG AGGTCATCTC CGATGAGCAG
CGCGGTACGC TGTTCAGCTT TCACTTGCCG GCCGATGCAC TGAGGCAGAT GCCGGGGCCG
TCGACAATCA GCCTGTAA
 
Protein sequence
MTNAISTDIA TIGRISAVPA ILQVICESSG MRFAAVARVT ECNWTACAVL DNLGFGLEVG 
GELEVATTLC HEIRSSHQTI VIDKASEDER YCQHQTPQRY RFESYISVPV FRTDGRFFGT
ICALDPNPAS LKGQAIQPMM ESFARLLAIQ IESEESVQHT ERALREERAM AEVREQFIAV
LGHDLRNPLF AITAGAELLT QRLDDDKNRA IARHIHTCGQ RASQLVRDVL DFARGRLGSG
IPLNLQPCPD LSEGLMHVAA ELQHVHPRRQ ILLQVDDIGG LYCDRERVTQ LLSNLIANAL
THGAPDGPVT VRAAIADEEF VLSVHNNGHP IAPQTLNQLF QPFTRPLSAA PRQGLGLGLY
IANQIALAHG GRMEVISDEQ RGTLFSFHLP ADALRQMPGP STISL