Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1170 |
Symbol | |
ID | 6110089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1290341 |
End bp | 1291558 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620935 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_001748044 |
Protein GI | 170720356 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.364137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00137418 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAACG CCATCAGCAC CGATATCGCC ACTATCGGCC GCATCAGTGC GGTGCCCGCC ATCCTTCAGG TCATCTGCGA ATCCAGCGGC ATGCGTTTCG CCGCCGTGGC ACGGGTTACC GAATGCAACT GGACTGCCTG CGCCGTACTC GACAACCTGG GCTTTGGTCT TGAGGTGGGC GGAGAGCTTG AGGTGGCAAC CACCCTGTGC CATGAGATTC GCAGCTCTCA CCAGACCATC GTGATCGACA AAGCCAGCGA AGATGAGCGC TACTGCCAGC ACCAGACGCC GCAGCGCTAT CGCTTCGAAA GCTACATATC CGTGCCGGTG TTCCGAACAG ATGGCCGCTT CTTCGGCACC ATCTGTGCCC TGGACCCGAA TCCGGCCTCG CTCAAAGGCC AAGCGATCCA GCCCATGATG GAGTCATTCG CCCGCTTGCT GGCCATCCAG ATCGAGAGTG AGGAGAGCGT CCAGCACACC GAGCGCGCCC TGCGCGAGGA ACGGGCGATG GCTGAAGTGC GCGAACAGTT CATCGCAGTG CTCGGCCATG ATCTGCGCAA TCCGCTGTTC GCCATCACCG CAGGCGCCGA ACTGTTGACT CAGCGCCTGG ACGACGACAA GAACCGCGCG ATCGCCCGCC ACATTCACAC TTGCGGGCAG CGGGCTTCAC AGCTGGTGCG CGACGTGCTG GATTTCGCCC GAGGCCGGCT CGGCAGCGGC ATCCCATTGA ACCTGCAGCC CTGCCCGGAC CTGTCCGAAG GCCTCATGCA TGTCGCTGCA GAACTGCAGC ACGTACACCC ACGGCGGCAG ATCCTCCTTC AGGTCGATGA TATCGGCGGC CTGTACTGTG ACCGCGAACG GGTGACCCAG CTACTCTCCA ACCTTATCGC CAACGCGCTG ACCCATGGTG CGCCTGACGG GCCAGTGACG GTCAGGGCGG CGATTGCCGA TGAGGAGTTC GTGCTTAGCG TGCACAACAA CGGGCACCCC ATCGCCCCAC AAACCCTGAA CCAATTGTTC CAGCCCTTCA CCAGGCCGCT GTCTGCGGCG CCAAGACAGG GGCTTGGCCT TGGCCTTTAT ATAGCCAATC AGATTGCCCT GGCCCATGGC GGACGCATGG AGGTCATCTC CGATGAGCAG CGCGGTACGC TGTTCAGCTT TCACTTGCCG GCCGATGCAC TGAGGCAGAT GCCGGGGCCG TCGACAATCA GCCTGTAA
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Protein sequence | MTNAISTDIA TIGRISAVPA ILQVICESSG MRFAAVARVT ECNWTACAVL DNLGFGLEVG GELEVATTLC HEIRSSHQTI VIDKASEDER YCQHQTPQRY RFESYISVPV FRTDGRFFGT ICALDPNPAS LKGQAIQPMM ESFARLLAIQ IESEESVQHT ERALREERAM AEVREQFIAV LGHDLRNPLF AITAGAELLT QRLDDDKNRA IARHIHTCGQ RASQLVRDVL DFARGRLGSG IPLNLQPCPD LSEGLMHVAA ELQHVHPRRQ ILLQVDDIGG LYCDRERVTQ LLSNLIANAL THGAPDGPVT VRAAIADEEF VLSVHNNGHP IAPQTLNQLF QPFTRPLSAA PRQGLGLGLY IANQIALAHG GRMEVISDEQ RGTLFSFHLP ADALRQMPGP STISL
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