| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1119 |
|---|
| Symbol | |
|---|
| ID | 6110038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1238852 |
|---|
| End bp | 1239478 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641620884 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001747993 |
|---|
| Protein GI | 170720305 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG TCCTTATCGT GGATGATCAT CCTGTCATAC GCTTGGCAGT GCGCATGCTG
ATGGAGCGGC ATGGATACGA TGTGGTCGCG GAAACCGACA ACGGCGTGGC AGCTTTGCAG
CTAACCAGGG AGTACCTGCC CGATATCGTG GTGCTGGATA TTGGCATTCC CAAGCTCGAT
GGGTTGGAAG TCATTGCCCG TATGGCTTCG GCAAGCCCGG GCAGTCGGGT GCTGGTGCTT
ACCTCGCAGG CGCCGGGGCA TTTCTCGATG CGTTGCATGC AGGCAGGGGC TTCTGGGTAC
GTGTGCAAGC AACAGGAGCT CACCGAGCTG CTTAGTGCGA TCAAAGCTGT GCTGTCTGGT
TACAGTTATT TTCCCAACCA GGCATTGCAC AAGTCGCGCG GCCGGGTTGG GGGAGCCAGC
GAGACGGAGA TGGTCGATCG CCTGTCGGCA CGCGAAATGA TGGTGCTACA GCAGCTGGCG
CGGGGCAGGT CCAACAAGGA GATAGCGGAC AGCATGTTCC TAAGCAACAA GACGGTCAGT
ACCTACAAGA CCCGCCTGCT GCTCAAGCTT AATGCCCACT CGTTGGTGGA CTTGATCGAA
TTGGCCCGGC GGCATGGCCT TACGTGA
|
|---|
| Protein sequence | MNKVLIVDDH PVIRLAVRML MERHGYDVVA ETDNGVAALQ LTREYLPDIV VLDIGIPKLD
GLEVIARMAS ASPGSRVLVL TSQAPGHFSM RCMQAGASGY VCKQQELTEL LSAIKAVLSG
YSYFPNQALH KSRGRVGGAS ETEMVDRLSA REMMVLQQLA RGRSNKEIAD SMFLSNKTVS
TYKTRLLLKL NAHSLVDLIE LARRHGLT
|
|---|
| |