| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1082 |
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| Symbol | |
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| ID | 6110001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1190253 |
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| End bp | 1191599 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620847 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001747956 |
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| Protein GI | 170720268 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0774059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCAC TGCCCAACAT TCGCTACACC GGCACCGCTC TGATTGCCTT GACCGCCTGT
TTTTCGTCCA CAGCCAGCGC CAGTGAAATG TTCGCCAGCG ACTCGCCATG GATGCTTGGT
GACTGGGGCG GCACCCGCAG CGAGCTGCTG GAAAAAGGCT ACGACTTCAC CCTCGGCTAC
ACCGGCGAGA TGGGCAGCAA CCTGCACGGC GGTTACGACC ATGACCGCAC CGCGCGGTAC
AGCGACCAGT TCACCTTCGG CAGCCACCTG GACCTGGAAA AAATCCTGGG CTGGCAAGAC
ACCGAACTGC AGCTGACCAT CACCGAACGC CATGGGGACA ACATCAGCAA CGACCGCATC
AACGACCCGC GGGTCGGCGG CTTCACTTCG GCCCAGGAAG TCTGGGGCCG GGGTGAAACC
TGGCGGCTGA CCCAGATGTG GATCAGGCAG AAATACTTCG ATGGCGCCCT GGACGTGAAA
TTCGGCCGCT TCGGTGAAGG CGAGGACTTC AACAGTTTCC CCTGCGACTT CCAGAACCTG
GCCTTCTGCG GCTCGCAAGT AGGCAACTGG GTCGGAGGCA TCTGGTACAA CTGGCCCGTC
AGCCAGTGGG CGCTACGTGT GCGCTACAAC ATCAACGACG CCCTCTATGC TCAGGTCGGG
GTGTTCGAGC AGAACCCCTC CAACCTCGAA TCCGGCAACG GTTTCAAACT CAGCGGCAGC
GGTACCCAGG GTGCCGTAAT ACCGGTCGAA CTGGTGTGGA GTCCGCAGGT CAATGGCCTG
AAAGGGGAAT ATCGCGCCGG GTACTACTAC AGTAATGCCA AGGCACAGGA TGTTCTCAAG
GACAGCAACG GCCAGCCGGC AGCCATCAGT GGCGCCGCCT ACCGCAGCAG TTCGAGCAAG
CACGGCCTTT GGATCGGCGC CCAGCAGCAG GTTACCTCGC TGGCCTCCGA CCAGTCGCGC
GGCCTGAGCC TGTTCGCCAA TGCCACAGTG CACGACAAGA AGACCAATGC CATCGACAAC
TATGTGCAGG CAGGACTGGT ATACAAGGGC CCCTTCGATG CCCGCGCCAA GGACGACATC
GGTTTCGCCC TCGCTCGCGT GCACGTCAAC CCCGCCTACC GCAAGAACGC CCGCCTGGCC
AACCAGGCGG CAGGCCACTA CGACTACGAC AATCCGGGTT TCCTGCCCGT GCAGGACACC
GAGTACAGCG CTGAACTCTA TTACGGCATT CACCTGGCCG ACTGGCTCAC GGTGCGCCCG
AACCTGCAGT ACATCCGCCA TCCGGGCGGG GTGTCGCAGG TGGACGACGC CCTGATCGGT
GGCCTGAAGA TCCAAAGCAC TTTCTGA
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| Protein sequence | MFSLPNIRYT GTALIALTAC FSSTASASEM FASDSPWMLG DWGGTRSELL EKGYDFTLGY
TGEMGSNLHG GYDHDRTARY SDQFTFGSHL DLEKILGWQD TELQLTITER HGDNISNDRI
NDPRVGGFTS AQEVWGRGET WRLTQMWIRQ KYFDGALDVK FGRFGEGEDF NSFPCDFQNL
AFCGSQVGNW VGGIWYNWPV SQWALRVRYN INDALYAQVG VFEQNPSNLE SGNGFKLSGS
GTQGAVIPVE LVWSPQVNGL KGEYRAGYYY SNAKAQDVLK DSNGQPAAIS GAAYRSSSSK
HGLWIGAQQQ VTSLASDQSR GLSLFANATV HDKKTNAIDN YVQAGLVYKG PFDARAKDDI
GFALARVHVN PAYRKNARLA NQAAGHYDYD NPGFLPVQDT EYSAELYYGI HLADWLTVRP
NLQYIRHPGG VSQVDDALIG GLKIQSTF
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