Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1073 |
Symbol | rnc |
ID | 6109992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1179684 |
End bp | 1180373 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620838 |
Product | ribonuclease III |
Protein accession | YP_001747947 |
Protein GI | 170720259 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCTT CCCTTGCCCG TCTCGAGCGC AAGCTCGGTT ACACCTTCAA AGACCAGGAC CAGATGGTGC TGGCCCTGAC CCATCGCAGC TACGCCGGGC GCAACAATGA GCGCCTGGAG TTTCTCGGTG ATGCCATTCT CAACTTCGTG GCCGGCGAGG CGCTGTTCGA GCGCTTCCCG CAGGCCCGCG AAGGCCAGCT GTCGCGCTTG CGTGCCCGCT TGGTCAAGGG CGAGACCCTG GCCCGGCTCG CTCGCGGTTT CGACCTGGGT GAGTACCTGC GCCTGGGTTC CGGTGAACTC AAGAGCGGCG GTTTCCGCCG CGAGTCGATC CTGGCCGATG CCCTCGAAGC CCTGATCGGC GCCATCTACC TTGATGCCGA CATGCAGACC GCTCGCGAGC GTGTGTTGGC CTGGCTGACT GACGAGTTCG AAAGCCTGAC CCTGGTCGAC ACCAACAAAG ACCCGAAAAC CCGCCTGCAG GAGTTCCTGC AGTCGCGTAG CTGTGAGCTG CCTCGTTACG AGGTGGTGGA CATCCAGGGC GAACCGCACT GCCGTACCTT CTTCGTCGAA TGCGAAGTGG TGCTGCTGAA CAACAAGAGC CGTGGCCAGG GCGTTAGCCG GCGTATTGCC GAGCAAGTCG CCGCCGCCGC CGCATTGATC GCCCTGGGCG TGGAGAATGG CAATGACTGA
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Protein sequence | MSASLARLER KLGYTFKDQD QMVLALTHRS YAGRNNERLE FLGDAILNFV AGEALFERFP QAREGQLSRL RARLVKGETL ARLARGFDLG EYLRLGSGEL KSGGFRRESI LADALEALIG AIYLDADMQT ARERVLAWLT DEFESLTLVD TNKDPKTRLQ EFLQSRSCEL PRYEVVDIQG EPHCRTFFVE CEVVLLNNKS RGQGVSRRIA EQVAAAAALI ALGVENGND
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