Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1066 |
Symbol | |
ID | 6109985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1170843 |
End bp | 1172447 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620831 |
Product | L-aspartate oxidase |
Protein accession | YP_001747940 |
Protein GI | 170720252 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0029] Aspartate oxidase |
TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000905222 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC AATTCCAACA TGATGTCCTG GTGATCGGCA GCGGCGCAGC CGGTCTCAGC CTGGCACTCA ACCTTCCCGC CCACCTGCGC ATCGCCGTAC TGAGCAAGGG CGACCTGGCC AATGGCTCGA CCTTCTGGGC CCAAGGTGGC GTGGCCGCGG TGCTGGACGA CACCGATACC GTGCAGTCCC ATGTCGAGGA CACACTCAAC GCCGGTGGCG GCCTTTGCCA CGAAGACGCC GTGCGATTCA CCGTCGAGCA CAGCCGCGAA GCCATTGAGT GGCTGATCGA ACAGGGCGTG CCCTTTACCC GCGATGAGCA CTCCAGCGTT GACGATGGCG GGTTCGAATT TCACCTGACC CGTGAAGGCG GGCACAGCCA CCGACGCATC ATCCATGCTG CCGATGCCAC GGGCGCGGCC ATTTTCACCA CGTTGCTTGA GCAAGCCCGC AAACGCCCTA ACATCGAACT GCTTGAGCAA CGTGTAGCGG TCGACCTGAT TACCGAGCGG CGCCTGGGCT TGCCCGGCGA GCGATGCCTG GGCGCCTATG TGCTGAACCG CAACAGTGGT GAGGTGGATA CCTTCGGAGC GCGCTTTACA GTGCTTGCCA CCGGCGGTGC CGCCAAGGTC TACCTGTATA CCAGCAACCC CGATGGCGCC TGCGGCGATG GCATCGCCAT GGCCTGGCGC GCCGGCTGTC GGGTTGCCAA TCTGGAATTC AACCAGTTCC ATCCGACCTG CCTCTACCAT CCGCAGGCCA AGAGTTTCCT CATCACTGAA GCCCTGCGCG GCGAAGGCGC CCTGCTGCGC CTGCCCAATG GTGAACGCTT CATGCCGCGC TTCGACCCAC GCGAAGAACT CGCACCGCGC GACATCGTGG CCCGGGCCAT CGACCATGAG ATGAAGCGCC TGGGTGTGGA CTGCGTCTAC CTGGACATCA CGCACAAGCC GGCTGACTTC ATAAAAAGCC ATTTCCCGAC CGTCTATGAG CGCTGCCTGA CCTTCGGTAT CGACATCACC CGCCAGCCGA TCCCGGTAGT GCCCGCCGCC CACTACACCT GTGGCGGGGT GGTGGTCGAC GATCGCGGCC ATACCGACGT ACCGGGCCTG TACGCCATCG GCGAGACCAG CTTCACCGGC CTGCACGGCG CCAATCGCAT GGCCAGCAAC TCGCTGCTCG AGTGTTTCGT CTACGGCCGT TCCGCTGCCG CGGACATCGA GGCCCGTCTG GCGCAGATTG CCATGCCCAA AGCCCTGCCA TGCTGGGATG CCAGCCAGGT CACCGACTCG GATGAGGATG TGATCATCGC GCACAACTGG GACGAACTGC GGCGGTTCAT GTGGGACTAC GTGGGCATCG TGCGCACGAG CAAGCGCCTG CAGCGTGCCG AGCATCGCGT GCGCCTGCTA CTGGACGAAA TCGACGAGTT CTACAGCAAC TACAAGGTCA GCCGCGACCT GATCGAGCTG CGCAACCTGG CACAGGTGGC GGAGTTGATG ATCCGCTCGG CGATGCAGCG CAAGGAAAGC CGCGGGTTGC ATTACACCCT GGATTACCCC GGCATGTTGG CTGAGGCCAA GGACACCATA CTGAGTCCGG CCTGA
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Protein sequence | MSQQFQHDVL VIGSGAAGLS LALNLPAHLR IAVLSKGDLA NGSTFWAQGG VAAVLDDTDT VQSHVEDTLN AGGGLCHEDA VRFTVEHSRE AIEWLIEQGV PFTRDEHSSV DDGGFEFHLT REGGHSHRRI IHAADATGAA IFTTLLEQAR KRPNIELLEQ RVAVDLITER RLGLPGERCL GAYVLNRNSG EVDTFGARFT VLATGGAAKV YLYTSNPDGA CGDGIAMAWR AGCRVANLEF NQFHPTCLYH PQAKSFLITE ALRGEGALLR LPNGERFMPR FDPREELAPR DIVARAIDHE MKRLGVDCVY LDITHKPADF IKSHFPTVYE RCLTFGIDIT RQPIPVVPAA HYTCGGVVVD DRGHTDVPGL YAIGETSFTG LHGANRMASN SLLECFVYGR SAAADIEARL AQIAMPKALP CWDASQVTDS DEDVIIAHNW DELRRFMWDY VGIVRTSKRL QRAEHRVRLL LDEIDEFYSN YKVSRDLIEL RNLAQVAELM IRSAMQRKES RGLHYTLDYP GMLAEAKDTI LSPA
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