| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1007 |
|---|
| Symbol | purU |
|---|
| ID | 6109925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1105368 |
|---|
| End bp | 1106219 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641620771 |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | YP_001747881 |
|---|
| Protein GI | 170720193 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
|---|
| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000029138 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000000593821 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCT ATCGTCTGGT GATCGCTTGC CCCGACCGTG TTGGTATCGT GGCGAAAGTC
AGTAATTTCC TGGCTTTGTA CAATGGCTGG ATCAACGAAG CGAGCCACCA CTCCGATGAG
CAGAGCGGCT GGTTCTTCAT GCGCCATGAA ATCCGCGCCG AATCGCTGCC ATTCGGTATC
GAGGCTTTCC GTGAAGCCTT CTCGCCCATC GCCGAAGAGT TTTCCATGGC CTGGCGCATT
ACTGACTCGG CTCAGAAAAA GCGTGTGGTG CTGATGGCGA GCCGCGAATC CCACTGCCTG
GCTGATCTGT TGCATCGCTG GCACACCGAT GAACTGGATT GCGAGATCCC TTGCGTGATT
TCCAACCACA ACGACCTGCG CAGCATGGTC GAGTGGCACG GCATCCCGTT CTTCCATGTA
CCGGTCGACC CGAAAGACAA GGCGCCTGCG TTTGCTGAAG TGTCGCGCCT GGTTCAGGAG
CATGCGGCTG ATGTGGTGGT GCTTGCGCGT TACATGCAAA TCCTGCCACC GCAGCTGTGC
CAGGATTACG CCGAAAAAGT CATCAACATC CACCACAGCT TCCTGCCGTC GTTCGTCGGC
GCCAAGCCTT ACCATCAGGC CGCCCTGCGT GGGGTGAAGC TGATTGGTGC GACTTGCCAC
TACGTGACTG AAGAGCTGGA CGCCGGCCCG ATCATCGAGC AGGACGTGGT ACGCGTGAGC
CATGCCGACA GCATCGAGGA CATGGTCCGC TTCGGCCGCG ACGTCGAGAA GATGGTGCTT
GCCCGTGGCC TGCGCTATCA CTTGGAAGAC CGCGTGCTGG TGCACGGCAA CAAGACTGTC
GTGTTCGATT GA
|
|---|
| Protein sequence | MRTYRLVIAC PDRVGIVAKV SNFLALYNGW INEASHHSDE QSGWFFMRHE IRAESLPFGI
EAFREAFSPI AEEFSMAWRI TDSAQKKRVV LMASRESHCL ADLLHRWHTD ELDCEIPCVI
SNHNDLRSMV EWHGIPFFHV PVDPKDKAPA FAEVSRLVQE HAADVVVLAR YMQILPPQLC
QDYAEKVINI HHSFLPSFVG AKPYHQAALR GVKLIGATCH YVTEELDAGP IIEQDVVRVS
HADSIEDMVR FGRDVEKMVL ARGLRYHLED RVLVHGNKTV VFD
|
|---|
| |