Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1006 |
Symbol | |
ID | 6109924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1104695 |
End bp | 1105072 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641620770 |
Product | transcriptional regulator MvaT, P16 subunit |
Protein accession | YP_001747880 |
Protein GI | 170720192 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000105934 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000000004027 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCTGA TCAACGAATA CCGCGCCACC GAAGAAGCCA TCAAGGAACT TCAGGCCCGC CTGGCCAACC TGTCGCAGGA TGACAAGCTG AAAAAAGAAC TGGAGTTCGA AGGCAAACTG CGCACACTGA TGGGCGAATA CTCCAAATCG CTGCGCGACG TCATTGCCCT GCTCGACCCA GAATCGAAAC TGAGCAAAGG GCCACGTGGC GCAGTCAAGA CCACCGCCAC CAAACGTGCG CGCAAGGTCA AGCAATACAA GAACCCGCAC AATGGTGAAG TGATCGAAAC CAAAGGCGGC AACCACAAAA CCCTGAAAGA GTGGAAAGCC AAATGGGGTG GCGACGTGGT TGAAAGCTGG GCGACCCTGC TGGACTGA
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Protein sequence | MSLINEYRAT EEAIKELQAR LANLSQDDKL KKELEFEGKL RTLMGEYSKS LRDVIALLDP ESKLSKGPRG AVKTTATKRA RKVKQYKNPH NGEVIETKGG NHKTLKEWKA KWGGDVVESW ATLLD
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