| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1000 |
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| Symbol | |
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| ID | 6109918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1097888 |
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| End bp | 1099411 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620764 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001747874 |
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| Protein GI | 170720186 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000000213492 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGTGA TCAAGCAAGA CGACCTGATT CAGAGCGTCG CCGACGCCCT GCAATTCATT
TCGTACTACC ACCCCGTCGA TTTCATCCAG GCGATGCACG AGGCCTACCT GCGTGAAGAG
TCGCCTGCCG CGCGCGACTC CATCGCCCAG ATCCTGATCA ACTCGCGCAT GTGCGCCACC
GGCCACCGCC CGATCTGCCA GGATACCGGT ATCGTCACCG TATTCGTGCG CGTCGGCATG
GACGTGCGCT GGGACGGCGC CACCCTGAGC GTCGACGACA TGATCAACGA AGGTGTGCGT
CGCGCCTACA ACCTGCCTGA AAACGTTCTG CGTGCCTCGA TCCTGGCCGA CCCGGCCGGT
GCCCGCAAGA ACACCAAGGA CAACACTCCA GCCGTCATCC ACTACTCGAT CGTCCCAGGC
GACAAGGTCG AAGTCGATGT GGCAGCCAAA GGCGGCGGCT CGGAAAACAA GTCGAAGATG
GCCATGCTCA ACCCGTCCGA CTCGATCGTC GACTGGGTCC TGAAGACCGT CCCGACCATG
GGTGCCGGCT GGTGCCCGCC TGGCATGCTC GGCATCGGCA TCGGCGGTAC CGCCGAAAAA
GCCGCGGTCA TGGCCAAGGA AGTGTTGATG GAGTCCATCG ACATCCATGA ACTCAAAGCC
CGTGGCCCGC AGAACCGCCT CGAAGAGATC CGCCTGGAGC TGTTCGAGAA GGTCAACCAG
CTGGGTATCG GCGCCCAGGG TCTTGGTGGC CTGACCACCG TGCTCGACGT CAAGATCATG
GACTACCCGA CCCACGCCGC ATCCCTGCCG GTGTGCATGA TCCCCAACTG CGCCGCCACC
CGTCACGCGC ACTTCGTGCT CGACGGTTCC GGCCCGGCCG AGCTGGAAGC CCCGTCGCTG
GACGCCTACC CGGAAATCGT CTGGGAAGCC GGCCCGAGTG CCCGCCGCGT CAACCTCGAC
GACATCACCC CGGAAGAAGT GGCCAGCTGG AAGCCGGGCG AGACCATCCT GCTCAACGGC
AAGATGCTCA CCGGCCGCGA TGCCGCGCAC AAGCGCATGG TCGAGATGCT CAACCGTGGT
GAAACACTGC CGGTTGACCT GAAAGGCCGC TTCATCTACT ACGTCGGCCC GGTCGACCCG
GTCGGTGACG AAGTGGTAGG CCCGGCTGGC CCGACCACCG CCACCCGGAT GGACAAGTTC
ACCCGCCAGA TCCTTGAACA AACCGGCCTG CTGGGCATGA TCGGCAAGTC CGAACGTGGC
CCGACCGCCA TTGAAGCGAT CAAGGACAAC AAGGCCGTGT ACCTGATGGC CGTCGGTGGC
GCTGCCTACC TGGTGGCCCA GGCGATCCGC AAGTCCAAGG TTCTGGCCTT CGCCGAACTG
GGCATGGAAG CGATCTACGA GTTCGAAGTC AAAGACATGC CAGTCACCGT CGCGGTGGAC
AGCAACGGTG AGTCGGTGCA CATCACCGGC CCTGCGCTGT GGCAGAGCAA GATCGCCGAA
AGCCTGGCGG TAGAAGTCAA GTAA
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| Protein sequence | MTVIKQDDLI QSVADALQFI SYYHPVDFIQ AMHEAYLREE SPAARDSIAQ ILINSRMCAT
GHRPICQDTG IVTVFVRVGM DVRWDGATLS VDDMINEGVR RAYNLPENVL RASILADPAG
ARKNTKDNTP AVIHYSIVPG DKVEVDVAAK GGGSENKSKM AMLNPSDSIV DWVLKTVPTM
GAGWCPPGML GIGIGGTAEK AAVMAKEVLM ESIDIHELKA RGPQNRLEEI RLELFEKVNQ
LGIGAQGLGG LTTVLDVKIM DYPTHAASLP VCMIPNCAAT RHAHFVLDGS GPAELEAPSL
DAYPEIVWEA GPSARRVNLD DITPEEVASW KPGETILLNG KMLTGRDAAH KRMVEMLNRG
ETLPVDLKGR FIYYVGPVDP VGDEVVGPAG PTTATRMDKF TRQILEQTGL LGMIGKSERG
PTAIEAIKDN KAVYLMAVGG AAYLVAQAIR KSKVLAFAEL GMEAIYEFEV KDMPVTVAVD
SNGESVHITG PALWQSKIAE SLAVEVK
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