| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0974 |
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| Symbol | |
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| ID | 6109892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1070768 |
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| End bp | 1073812 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620738 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_001747848 |
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| Protein GI | 170720160 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.543426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0386559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCA CCGACCCGTT CATCCGCCGC CCGGTGCTGG CCAGCGTGGT CAGCCTGCTG
ATCCTCCTGC TGGGTTTTCA GGCCTGGAAC AAGCTGCAGA TCCGCCAGTA CCCGCAGATG
GAAAACGCCC TGATCACGGT GACCACCGCC TACCCGGGAG CCAATGCCGA AACCATCCAG
GGCTACATCA CCCAACCGCT GCAGCAGAGC CTTGCCAGCG CCGAAGGCAT CGACTACATG
ACCTCGGTGA GCCGGCAGAA CTTCTCGATC ATCTCCATCT ATGCGCGTAT CGGCGCCGAC
AGCGACCGCC TGTTCACCGA ATTGCTGGCC AAGGCCAACG AAGTACGCAA CCAGCTGCCG
CAAGACGCAG AAGACCCGGT ATTGAGCAAA GAAGCCGCAG ATGCCTCGGC GCTGATGTAC
ATCAGCTTTT ACAGCAAGGA AATGAGCAAC CCGCAGATCA CCGACTACCT GTCACGGGTC
ATCCAGCCGA AACTTGCAAC CTTGCCGGGC ATGGCCGAGG CCGAGATCCT CGGCAACCAG
GTGTTCGCCA TGCGCATCTG GATCGACCCG GTCAAACTGG CAGCATTCGG CCTTGCCGCC
ACTGACGTGA CCAGCGCCGT ACGCCGCTAC AACTTTCTCG CCGCCGCTGG TGAGGTGAAG
GGCGAATACG TGGTCACCAG CATCAACGCC AACACCGAAC TGAAGTCGGC CGAGGCTTTT
GCCGCATTGC CCCTCAAGAC CTCCGGCGAC AGCCGGGTCT TGCTCGGTGA TGTGGCACGG
GTCGAGATGG GAGCGGAAAA TTACGACACC GTCAGCTCGT TCGATGGCAC GCCTTCGGTC
TACATCGGCA TCAAGGCCAC CCCGGCCGCC AACCCGCTGG AGGTGATCAA GGAAGTACGC
CGCATCATGC CGGAGCTGGA AAGCCAGTTG CCGTCCGCGC TCAAGGGGTC GATTGCCTAT
GACGCCACGC TGTTCATCCA GGCCTCGATC GACGAAGTGG TCAAGACCCT TGGCGAAGCG
GTGCTGATCG TCATCGTGGT GGTATTTTTA TTCCTCGGCG CACTGCGCTC GGTACTGATC
CCGGTGGTGA CCATCCCACT GTCGATGATC GGGGTGCTGT TCTTCATGCA GATGATGGGC
TATTCGCTCA ACCTGCTAAC CCTGCTGGCA ATGGTACTGG CCATCGGCCT GGTAGTGGAC
GATGCCATCG TCGTGGTGGA AAACATCCAC CGGCACATGG AAGAAGGCAA ATCGCCGTTG
GACGCCGCGC TGGAAGGTGC GCGAGAAATC GCCATGCCAG TGGTGTCGAT GACCATCACC
CTGGCCGCGG TTTACGCACC TATCGGCTTC CTGACCGGGC TCACCGGCGC CTTGTTCAAG
GAGTTCGCCC TGACCCTGGC AGGGGCGGTG ATCATCTCTG GCGTCGTCGC CCTTACCCTG
TCGCCGATGA TGTGTGCCCT GCTGTTGCGT CGGGAGCACA ATGCCAGCGG GCTGGCCCAT
CGCCTTGACG TGCTGTTCGA GCGGATCAAG GGCCGCTACC AGCGCCTGCT GCACAGCACC
CTGAACAGCC GCCCGGTGGT GCTGGTTTTC GCTGTGATCA TCCTGTGCCT GATCCCGGTG
CTGCTCAAGT TCACCCAGAA CGAGCTGGCA CCGAACGAGG ATCAGGGGGT CATCTTCATG
ATCAGCAGCT CGCCACAACC AGCCAACCTC GACTACCTCA ATGCCTACAC CGACCAGTTC
ACCCCACTGT TCAAGGCGTT CCCCGAATAC TACTCGTCGT TCCAGATCAA CGGATTCAGC
GGCGTGCAGA GCGGCATCGG AGGTTTCCTG CTCAAGCCTT GGAACGAGCG CGACCGCACG
CAAATGGAGT TGCTGCCCCT GGTACAGGCC AAACTCGACA ACATCAGCGG CCTGCAGATC
TTCGGGTTCA ACCTGCCGTC ACTGCCAGGC ACCGGCGAAG GCCTGCCGTT CCAGTTCGTC
ATCAATACCG CAGGTGGTTA CCCGGCGCTG CTGGAGGTTG CCCAGCGGGT CAAGGAACGC
GCCCAGGCAT CGGGCAAATT TGCCTTCCTC GACATCGACC TGGCGTTCGA CAAGCCCGAG
GTGGTGGTCG ACATCGACCG CGCCAAGGCT GCGCAGATGG GTGTATCCAT GGACGTCCTT
GGCGGCACCT TGGCGACCTT GCTGGGCGAG GGGGAAATCA ACCGTTTCAC TCTCGAAGGC
CGCAGCTACA AAGTCATCGC CCAGGTCGAA CGGCCCTACC GCGACAACGC CGGCTGGCTC
AACAGCTATT ACGTCAAGAA CGACCAGGGC CAACTGCTGC CACTGTCGAC CCTGATCACC
CTTAGCGACC GAGCACGCCC GCGCCAGCTC AACCAGTTCC AGCAACTGAA TTCGGCGATC
ATCCAAGGTG TGCCTTTGGT CAGTATCGGC GAGGCCTTGC AGACGGTACG GGATATTGCT
GCCGAGCAGG CGCCGGAAGG TTTCTCCTTC GACTATGCCG GCGCGGCACG GCAGTACATA
CAGGAAGGCA GTGCGCTGTG GGTGACTTTC GGCCTGGCGC TGGCGATCAT CTTCCTGGTA
CTGGCGGCAC AGTTTGAAAG CTTCCGCGAC CCGCTGGTGA TTCTGGTGAC GGTACCGCTG
TCGATCTGCG GGGCGCTGTT GCCGCTGTTC CTAGGTGTCT CCAGCATGAA CATCTACACC
CAGGTCGGGT TGGTGACGCT GATCGGGCTG ATCAGCAAGC ACGGTATCCT GATCGTCGAG
TTCGCCAACC AGTTGCGTGA GGAAAAAGGG CTGAGCGCAA GGGACGCTAT CGAGGAAGCT
GCGGCCATTC GCCTACGCCC GGTGCTGATG ACCACCGCCG CAATGGTATT TGGCATGGTG
CCGCTGATTC TGGCGACCGG GGCCGGGGCG GTGAGCCGTT TTGACATCGG TACGGTGATT
GCGACGGGAA TGTCGATCGG GACCTTGTTT ACCTTGTTTG TGCTGCCGTG TATTTACACC
CTGTTGGCGC ACAAGACAGC GCCGACGGAA CCTGTTGTTG CATGA
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| Protein sequence | MAFTDPFIRR PVLASVVSLL ILLLGFQAWN KLQIRQYPQM ENALITVTTA YPGANAETIQ
GYITQPLQQS LASAEGIDYM TSVSRQNFSI ISIYARIGAD SDRLFTELLA KANEVRNQLP
QDAEDPVLSK EAADASALMY ISFYSKEMSN PQITDYLSRV IQPKLATLPG MAEAEILGNQ
VFAMRIWIDP VKLAAFGLAA TDVTSAVRRY NFLAAAGEVK GEYVVTSINA NTELKSAEAF
AALPLKTSGD SRVLLGDVAR VEMGAENYDT VSSFDGTPSV YIGIKATPAA NPLEVIKEVR
RIMPELESQL PSALKGSIAY DATLFIQASI DEVVKTLGEA VLIVIVVVFL FLGALRSVLI
PVVTIPLSMI GVLFFMQMMG YSLNLLTLLA MVLAIGLVVD DAIVVVENIH RHMEEGKSPL
DAALEGAREI AMPVVSMTIT LAAVYAPIGF LTGLTGALFK EFALTLAGAV IISGVVALTL
SPMMCALLLR REHNASGLAH RLDVLFERIK GRYQRLLHST LNSRPVVLVF AVIILCLIPV
LLKFTQNELA PNEDQGVIFM ISSSPQPANL DYLNAYTDQF TPLFKAFPEY YSSFQINGFS
GVQSGIGGFL LKPWNERDRT QMELLPLVQA KLDNISGLQI FGFNLPSLPG TGEGLPFQFV
INTAGGYPAL LEVAQRVKER AQASGKFAFL DIDLAFDKPE VVVDIDRAKA AQMGVSMDVL
GGTLATLLGE GEINRFTLEG RSYKVIAQVE RPYRDNAGWL NSYYVKNDQG QLLPLSTLIT
LSDRARPRQL NQFQQLNSAI IQGVPLVSIG EALQTVRDIA AEQAPEGFSF DYAGAARQYI
QEGSALWVTF GLALAIIFLV LAAQFESFRD PLVILVTVPL SICGALLPLF LGVSSMNIYT
QVGLVTLIGL ISKHGILIVE FANQLREEKG LSARDAIEEA AAIRLRPVLM TTAAMVFGMV
PLILATGAGA VSRFDIGTVI ATGMSIGTLF TLFVLPCIYT LLAHKTAPTE PVVA
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