| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0952 |
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| Symbol | secA |
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| ID | 6109870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1047646 |
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| End bp | 1050381 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641620716 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001747826 |
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| Protein GI | 170720138 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0825875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCGC CTTTGTTAAA GAAACTTTTT GGAAGCAAGA ACGAGCGTGA AGTCAAACGC
ATGCTCAAGA CGGTGAACAT CGTCAATGCC TTCGAAGAGA AAATGGTCGC CCTCTCCGAT
GAGCAACTGC GCGCCAAAAC CGCAGAGTTC AAGGAGCGTC TGGCCAAAGG CGAGACACTG
GACCAACTGC TGCCTGAAGC CTTCGCCGTG GCCCGTGAAG CCGGCAAGCG CGTGATGGGC
ATGCGCCACT TCGATGTGCA GCTGATCGGC GGCATGACCC TGCATGAGGG CATGATCGCA
GAAATGCGCA CCGGTGAAGG CAAGACCTTG GTCGGTACCC TGGCCGTATA CCTCAACGCT
CTATCCGGTA AAGGGGTGCA CGTGGTCACG GTCAACGACT ACCTGGCCCG CCGCGACGCC
AACTGGATGC GCCCTCTGTA CGAATTCCTC GGTCTGTCCG TAGGCATCGT CTCGGCCTTC
CAGCCGCCAG AGGAAAAACG CGCTGCGTAT GCGTCCGATA TCACCTACGG CACCAACAAC
GAATTCGGTT TCGACTACCT GCGCGACAAC ATGGCTTTCA GCCTGGAAGA GAAGTTCCAG
CGTGAACTGA ATTTCGCCGT GATCGACGAA GTCGACTCGA TCCTCATCGA CGAAGCCCGT
ACGCCGCTGA TCATCTCAGG CCAGGCCGAA GACAGTTCCA AGCTGTACAT CGAGATCAAC
CGCCTGATCC CGCGCCTGAC CCAGCACATC GAAGAAGTCG AAGGCCAGGT CACCCAGGAA
GGCCACTTCA CCATCGACGA AAAGAGCCGC CAGGTCGAGC TCAACGAAGC CGGTCACCAG
TTCATCGAAG AGATGCTCAC CCAGTCCGGC CTGCTGGCTG AAGGCGAGAG CCTCTACTCG
TCGCACAACC TTGGCCTGCT GACCCATGTT TATGCCGGCC TGCGTGCGCA CAAACTGTTC
CACCGCAACG TCGAGTACAT CGTTCAGGAC GGTCAGGTCC TGCTTATCGA CGAGCACACC
GGCCGTACCA TGCCTGGCCG TCGCCTGTCC GAAGGCCTGC ACCAGGCCAT CGAGGCGAAA
GAGAACCTGA ACATCCAGGC CGAGAGCCAG ACCCTGGCTT CGACCACCTT CCAGAACTAT
TTCCGTCTGT ACACCAAGCT GTCCGGCATG ACCGGTACCG CCGACACCGA AGCGTTCGAG
TTCCAGTCGA TCTACGGCCT CAACGTGATG GTGATCCCGC CGAACAAGCC GCTGGCGCGT
AAGGACTTCA ACGACCTGGT GTACCTGACC GCAGACGAGA AGTACGCTGC GATCATTGCC
GACATCAAGG AAAGCATGAC CCAGGGCCGT CCGGTTCTGG TGGGTACTGC GACCATTGAA
ACCTCCGAGC ACATGTCGAA CTTGCTGAAG CAGGAAGGCA TCGAGCACAA GGTCCTGAAC
GCCAAGTACC ACGAAAAGGA AGCCGAGATC ATCGCGCAAG CGGGGGCTCC GGGTGCACTG
ACCATTGCCA CCAACATGGC CGGTCGTGGT ACCGACATTC TTCTGGGCGG TAACTGGGAA
GCCGAGGTGG CTGCCCTGGA GAACCCGAGC CCCGAGCAGA TCGCTCAGAT CAAGGCCGAC
TGGCAGAAGC GTCACCAGCA GGTGATCGAG TCCGGTGGCC TGCATGTGAT CGCCTCCGAA
CGCCATGAAT CGCGTCGTAT CGACAACCAG CTGCGTGGCC GTTCCGGCCG TCAGGGCGAC
CCGGGTTCCA GCCGCTTCTA CCTGTCGCTG GAAGACAGCC TGATGCGTAT CTTCGCCTCC
GATCGGGTGA AGAACTTCAT GAAAGCACTG GGCATGCAGT CCGGTGAGGC CATCGAACAC
CGTATGGTCA CCAACGCCAT TGAAAAGGCG CAGCGCAAGG TCGAAGGCCG CAACTTCGAT
ATTCGTAAGC AACTGCTCGA ATACGATGAC GTTGCCAACG AACAGCGCAA GGTGATCTAC
CACATGCGCA ACAGCCTGCT GGCTGCCGAG AACATCGGTG ACACCATCGC CGAGTTCCGT
CAGGAAGTGC TCGATGCCAC TATCAACCAG CACATCCCGC CGCAGTCGCT GCCCGAACAG
TGGGACGTGG CCGGCCTGGA GGCTTCGCTG GCCAGCGACT TCGCCATCAA GCTGCCGATC
CAGCAGTGGC TCGACGAGGA CGATCACCTC TACGAGGAGA CCCTGCGCGA GAAGCTGCTG
AAGGAAATTA CCGACGCCTA CAACGAGAAG GAAGACCAGG CCGGCATCGA CGCCCTGCGT
ACGTTCGAGA AGCAGATCCT GCTGCGCGTG CTGGATGACC TGTGGAAAGA CCACCTGTCG
ACCATGGACC ACCTGCGCCA CGGCATTCAC CTGCGTGGTT ACGCGCAGAA GAACCCGAAG
CAGGAGTACA AGCGCGAATC CTTCACCCTG TTCCAGGAAT TGCTCGAATC GATCAAGCGC
GACACTATCC GCGTGCTGTC GCACGTTCAG GTACGCCGCG AAGACCCGGT CGAAGAAGAA
GCCCGCCTGC GCCGCGAAGC CGAAGAACTG GCCAGCCGCA TGCAGTTCCA GCACGCCCCT
GCGCCAGGTC TTGAGAGCGA GCAACTGAGC GAAGAAGGCG CCGAAGTGGC GGTCGCCGTG
GCTCCAGTAC GCAACGATCA GAAGCTGGGC CGCAACGAGC CGTGCTGGTG TGGTTCGGGC
AAGAAGTTCA AGCATTGCCA TGGTCAGATC GAGTGA
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| Protein sequence | MFAPLLKKLF GSKNEREVKR MLKTVNIVNA FEEKMVALSD EQLRAKTAEF KERLAKGETL
DQLLPEAFAV AREAGKRVMG MRHFDVQLIG GMTLHEGMIA EMRTGEGKTL VGTLAVYLNA
LSGKGVHVVT VNDYLARRDA NWMRPLYEFL GLSVGIVSAF QPPEEKRAAY ASDITYGTNN
EFGFDYLRDN MAFSLEEKFQ RELNFAVIDE VDSILIDEAR TPLIISGQAE DSSKLYIEIN
RLIPRLTQHI EEVEGQVTQE GHFTIDEKSR QVELNEAGHQ FIEEMLTQSG LLAEGESLYS
SHNLGLLTHV YAGLRAHKLF HRNVEYIVQD GQVLLIDEHT GRTMPGRRLS EGLHQAIEAK
ENLNIQAESQ TLASTTFQNY FRLYTKLSGM TGTADTEAFE FQSIYGLNVM VIPPNKPLAR
KDFNDLVYLT ADEKYAAIIA DIKESMTQGR PVLVGTATIE TSEHMSNLLK QEGIEHKVLN
AKYHEKEAEI IAQAGAPGAL TIATNMAGRG TDILLGGNWE AEVAALENPS PEQIAQIKAD
WQKRHQQVIE SGGLHVIASE RHESRRIDNQ LRGRSGRQGD PGSSRFYLSL EDSLMRIFAS
DRVKNFMKAL GMQSGEAIEH RMVTNAIEKA QRKVEGRNFD IRKQLLEYDD VANEQRKVIY
HMRNSLLAAE NIGDTIAEFR QEVLDATINQ HIPPQSLPEQ WDVAGLEASL ASDFAIKLPI
QQWLDEDDHL YEETLREKLL KEITDAYNEK EDQAGIDALR TFEKQILLRV LDDLWKDHLS
TMDHLRHGIH LRGYAQKNPK QEYKRESFTL FQELLESIKR DTIRVLSHVQ VRREDPVEEE
ARLRREAEEL ASRMQFQHAP APGLESEQLS EEGAEVAVAV APVRNDQKLG RNEPCWCGSG
KKFKHCHGQI E
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