| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0946 |
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| Symbol | ddl |
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| ID | 6109864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1041424 |
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| End bp | 1042380 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620710 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001747820 |
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| Protein GI | 170720132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.427679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG CCTACGAGAA GTTGCATTCA ACCCTGGACG TCAAAGCGTT CGGCCGTGTC
GCTGTACTTT ACGGCGGCAA GAGCGCCGAG CGTGAAGTCT CGCTCAAGTC GGGCGCTGCC
GTGATCGAGG CGCTGAGCAG CGCCGGTGTC GACGTGGTCG CCATAGACGT GGGCGATGAC
CTGCTGGCCC GCCTGCAAAG CGAGAAGATC GACCGTGCCT TCATCATCCT GCACGGCCGC
GGCGGTGAGG ACGGCAGCAT GCAAGGCCTG CTGGAGTGCC TGGGCATTCC CTACACCGGC
AGTGGCATCC TCGCCTCGGC TCTGGCCATG GACAAGCTGC GGACCAAGCA GGTATGGCAA
AGCTTGGGCA TTCCGACACC GCGTCACGCC GTGCTGGCCA GCGAAGAAGA TTGTGTTGTA
GCCGGTACGG AACTGGGCTT CCCGCTGATC GTCAAACCTG CCCATGAAGG CTCTAGCATC
GGCATGGCCA AGGTGAACAG CGAGCGGGAA CTGGTTGCTG CCTGGCAAGA CGCCGCCAAA
TACGATTCTC AGGTGCTGGT CGAGCAATGG ATTCACGGCC CGGAGTTCAC CATCGCTGTT
CTGCGTGGCC AGGTGCTGCC GCCGATCGCC CTGGGTACTC CGCACGTGTT CTACGACTAC
GACGCCAAGT ACATCGCCAA TGACACCCAG TACCGCATCC CGTGCGGCCT GGACAGTGCC
AAGGAGCAGG AGCTTATCGA CCTGACCGCG CGCGCCTGCG ATGCCATCGG CATCGAAGGC
TGGGGCCGTC TGGACGTGAT GCAGGATGAG CAGGGCCGAT TCTGGCTGCT CGAAGTAAAC
ACCGCACCGG GCATGACTGA TCATAGCCTG GTGCCCATGG CGGCCCGCGC GGCCGGTCTG
GACTTCCAGC AGCTGGTGCT GGCGATCCTG GCCGACAGCG TAGCGACGCG AGGTTAA
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| Protein sequence | MTSAYEKLHS TLDVKAFGRV AVLYGGKSAE REVSLKSGAA VIEALSSAGV DVVAIDVGDD
LLARLQSEKI DRAFIILHGR GGEDGSMQGL LECLGIPYTG SGILASALAM DKLRTKQVWQ
SLGIPTPRHA VLASEEDCVV AGTELGFPLI VKPAHEGSSI GMAKVNSERE LVAAWQDAAK
YDSQVLVEQW IHGPEFTIAV LRGQVLPPIA LGTPHVFYDY DAKYIANDTQ YRIPCGLDSA
KEQELIDLTA RACDAIGIEG WGRLDVMQDE QGRFWLLEVN TAPGMTDHSL VPMAARAAGL
DFQQLVLAIL ADSVATRG
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