Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0874 |
Symbol | |
ID | 6109791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 964554 |
End bp | 966005 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641620638 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001747748 |
Protein GI | 170720060 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGG CATTACGCTT GAGCCCCTTG CTGCTAGCCG TGCTGATGGC CGGCTGCACC CTGGGCCCCG ACTTCAAGCG CCCGGCCAGC CAGGCCCCGC AGCAATGGGC ACCGCTGCAG GGCCAAGCTG CACCCAGCCA GCCGCAGGCA GAAGCGCTTG AACTGCGTTG GTGGGAGACC TTCCACGATG CGCGCCTGAG TGCGCTGATC CAGCAGGTGG CCGAGCGTAA CCTCGACCTG CAGATCGCCA GTGCGCGGCT GCTGCAAAGC CGCGCCTTGC GCAGTACGGT GGCTGCCGAC CAGGCGCCGT CGGTCGATGT GGATGGCGGC TACAGCCGCG CCCGTAATAG TGCCGAAGGC CTCAGCGACC CGTCCGGCAA GGCAGGCAAG TCGGCGTTCA ACCTGTGGCA GGGCGACCTG GTCGCCGGTT GGGAGCTGGA CCTCTGGGGC CGGGTGCGCC GGCAGGTGGA GGCTGCCGAC GCCACGGTGG AAGTGGCCGA GAATGACCGG CGCGGCGTGC TCTTGGCGCT GTTGTCGGAA ACCGCAGGCA ACTACATCCA GTTGCGTGCC GTGCAGCACA CGCTCGATGT CACGCGCGAC AACCTGAAGG TCGCCCGGCA CAGCCTGAAG CTGTCCCAGG ACCGCCAGGC CGAGGGTGTC GCCACCCGGC TCGACGTGGC CCAGGCCAGT GCCCAGGTTG CCTCGATCGA GGCCCGTCTG CCGAGCCTGG AGGCCCGGCG CGACGACCTG ATAAACGCGC TCAGCCTGCT GGCGGCCGAG CCGCCACGCA GTTTGCAGGC ACAGTTGCTT GAGGGCGGGG AGTTGCCCGC GCCGCAGCAG CAATTTGCGA TCGGCTTGCC ATCCGAGCTG GCCGAGCGCC GTCCGGACAT CCGCCAGGCC GAGGCACGGC TGCATGCGGC CACTGCCAGC ATTGGCGTGG CCAAGGCGGA TTTCTACCCC AGCATCCGGC TGTCCGGCAG CGTCGGCTTC CAGGCCATGC AACTGTCGGA TTTCGGCGCT TGGGACTCGC GCCGCTTTGC CTTCGGCCCA CAGCTGTCAT TGCCGATCTT CGAGGGTGGC CGGCTCAAGG GTACCCTGGC GCTGCGCGAG GCGCAGCAGC AGGAGGCGGC GCTCAACTAC CGCAAGGTGG TGCTCGGTGC CTGGCACGAG ATCGACGATG TGCTGCGCCT GTACAACGCC AGCCAGCTGC GCCGTGATCA TTTGGCCGAA GCGGTGCGGC AAAACCGCAT CGCCCTGGAA ACCGCCCAGC GTCAGTACGT GGAAGGCGCA GTGGACTTTC TCAACGTGCT GACCGTGCAG AGTGCGTTGC TGGCCAGCGA AGAGCAGTGG ATCGACAGTT CGGCGGCGGT ATCGCAGGCA TTGGTCGGGC TGTACAAGGC TTTGGGTGGT GGCTGGCAGG CGTTCGACGG GCAGCCGACG ACAAAGGTGT GA
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Protein sequence | MKPALRLSPL LLAVLMAGCT LGPDFKRPAS QAPQQWAPLQ GQAAPSQPQA EALELRWWET FHDARLSALI QQVAERNLDL QIASARLLQS RALRSTVAAD QAPSVDVDGG YSRARNSAEG LSDPSGKAGK SAFNLWQGDL VAGWELDLWG RVRRQVEAAD ATVEVAENDR RGVLLALLSE TAGNYIQLRA VQHTLDVTRD NLKVARHSLK LSQDRQAEGV ATRLDVAQAS AQVASIEARL PSLEARRDDL INALSLLAAE PPRSLQAQLL EGGELPAPQQ QFAIGLPSEL AERRPDIRQA EARLHAATAS IGVAKADFYP SIRLSGSVGF QAMQLSDFGA WDSRRFAFGP QLSLPIFEGG RLKGTLALRE AQQQEAALNY RKVVLGAWHE IDDVLRLYNA SQLRRDHLAE AVRQNRIALE TAQRQYVEGA VDFLNVLTVQ SALLASEEQW IDSSAAVSQA LVGLYKALGG GWQAFDGQPT TKV
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