| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0791 |
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| Symbol | |
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| ID | 6109708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 882659 |
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| End bp | 883369 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641620555 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001747665 |
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| Protein GI | 170719977 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0904596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCACT GGAATCACGA GCATTTACAT CGTTTGGTCA ACGAAAGCAC TCCCCAGAAG
GTGTTCGACC TCGCGGTACA CCTGGCACAA GACCTTGGCA TGGAGTTCAT GGGGCTCAAG
CTTCGCATTC AGCTTGCGGC CCAGGCACCC AAGCTCTACC TGTACAGTAA CTATCCGCTT
GCCTGGATCG AGCGTTATCA ACGCGACGAG TTCTACAAGC AGGACCCGGC AGCAGCACTC
AGTCACACGT CGACCGAGCC TGTACTGTGG ACCGATGAGT TGTATAGCGA AGCCCCGGAT
TTTCGTGAGC AGGCCTGCAA ACATGGCCTG CGCCACGGCT GGACTCAGTC GCTGCATGAC
CTCAGGCACA ACGAGACTCA GGTCAGTGTG GCAAGGCCCT TTGGCAAGAT CGACATCCAT
GAGCTGTACG ACAAGGCCGG CCAAGTGCAA TGGCTGTGCC ATACGCTGCA TGACACCATT
TGTGAGCATC ACCTGGCCAA GTTGAGTTCG CCGCTGAAGA TGAGCGACCG CGAACTCGAG
GTGCTGAAAT GGTCGGCCGC CGGCAAGACC GCCGCCGACG TTGCCTGCAT TCTGTCCCTG
TCGCAAAGCA CGGTGAACTT CCATATCCGC AGCGTAATCA CCAAGACCAA CGCCTCCAAC
AAGGCCGGCG CCGTTGCCAT TGCCATGATG CGTGGCCTGA TCGATCAATA G
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| Protein sequence | MPHWNHEHLH RLVNESTPQK VFDLAVHLAQ DLGMEFMGLK LRIQLAAQAP KLYLYSNYPL
AWIERYQRDE FYKQDPAAAL SHTSTEPVLW TDELYSEAPD FREQACKHGL RHGWTQSLHD
LRHNETQVSV ARPFGKIDIH ELYDKAGQVQ WLCHTLHDTI CEHHLAKLSS PLKMSDRELE
VLKWSAAGKT AADVACILSL SQSTVNFHIR SVITKTNASN KAGAVAIAMM RGLIDQ
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