Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0745 |
Symbol | |
ID | 6109657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 823345 |
End bp | 824229 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641620504 |
Product | periplasmic binding protein |
Protein accession | YP_001747619 |
Protein GI | 170719931 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.124358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000011582 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGCGTC GTCCCGCTGC CTTGCTTGCC TTGTGCGCAG CCTTGGTTGC TTCCACCCAG GCCCTGGCCG CCGAACTGCC ACAGCGCTGG GTCAGTGCTG GCGGCGCTTT GAGCGAGTGG GTCAGCGCTC TGGGCGGCGA GCCGCGCCTG GTGGGTGTGG ATACCACCAG CCAGCATCCT GAGTCACTCA AGGGCCTGCC AAGTATCGGT TACCAGCGCC AGTTGTCGGC CGAGGGCATT CTCAGCTTGC GCCCGGATGT GCTGGTGGGC ACAGAAGAGA TGGGGCCGCC ACCTGTGCTT GCGCAAATCC GCAAAGCCGG TGTTCGAGTG GAACTGCTCT CCAGCAAGGC TGACCTCGCC GCCGTGGACG CAAACCTCAA GCAGTTGGGT ATGTTGCTCG GCGCCGAGCA GAAGGCCGCG CAACTCGCTG CCGATTATCA TCAGCAGCTC GAGGTATTGC AGGTGCAGGT CAAGGAGGCT CAGGCCAGCC ACAAGGTGCC GGGTGTGCTG TTGCTGGTCG GCCATGCCGG TGCCAAACCG CTGATTGCCG GGCAGGGCAC CGCAGGTGAC TGGGTGCTGC GTCAGGCAGG TGGGCGAAAC CTGGCGGAGC ATCAGGGATA CAAGAATTTC TCCAATGAGG CGTTGGCGGC GCTGGACCCG GATGTCGTGG TGTTCTCCGA CCGCGCCTTG GTCGGCGAAC AGGCCCTGCA GGCACTGCTC AAGGAAAACC CGGCGCTGGC CACCTCCCGC GCGGTACGCG ACAAGCGCCT GGTGCCACTT GACCCGACCT TGCTGGTCGG CGGCCTTGGC CCGCGCTTGC CGGTGGCCCT GCAAGACCTG GCGGCTGCGT TCTACCCGGC GGTAAAGGTC AGCTTCACGC AATGA
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Protein sequence | MMRRPAALLA LCAALVASTQ ALAAELPQRW VSAGGALSEW VSALGGEPRL VGVDTTSQHP ESLKGLPSIG YQRQLSAEGI LSLRPDVLVG TEEMGPPPVL AQIRKAGVRV ELLSSKADLA AVDANLKQLG MLLGAEQKAA QLAADYHQQL EVLQVQVKEA QASHKVPGVL LLVGHAGAKP LIAGQGTAGD WVLRQAGGRN LAEHQGYKNF SNEALAALDP DVVVFSDRAL VGEQALQALL KENPALATSR AVRDKRLVPL DPTLLVGGLG PRLPVALQDL AAAFYPAVKV SFTQ
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