Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0723 |
Symbol | truB |
ID | 6109635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 796972 |
End bp | 797889 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620482 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001747597 |
Protein GI | 170719909 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.806567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0309098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCAGG TCAAACGTAT CCGCCGCAAC GTCAGCGGCA TCATCCTGCT CGACAAGCCT CTGGGGTTCA CCTCCAACGC CGCACTGCAG AAAGTGCGCT GGTTGCTCAA CGCAGAAAAG GCCGGCCACA CCGGCAGCCT CGACCCGTTG GCCACCGGCG TGCTGCCGCT GTGTTTCGGC GAAGCGACCA AGTTTTCGCA GTACCTGCTC GATTCCGACA AGGGCTACGA GACCGTCATG CAGCTGGGGC AGACTACAAA TACTGCCGAT GCAGAAGGCG AGGTCCTGCA AACCCGTGAA GTGACCGTTG GTCGTGCCGA CATCGAGGCG CTACTGCCAC GTTTTCGCGG CCCGATCAGC CAGATACCGC CGATGTACTC GGCGCTCAAG CGTGATGGTC AGCCGCTTTA CAAGCTGGCA CGTGCAGGAG AGGTAGTGGA GCGCGAGGCG CGTTCTGTTA CTATTAACCA CTTGGAGTTG CTCGAGTGCG AAGGCACCCG TGCACGGCTG AGCGTAGGAT GCAGCAAAGG CACCTATATC CGCACCCTGG TGGAGGATAT CGGCGAGGCC CTCGGCTGCG GCGCCTATGT TGCCGAGCTG CGCAGGACCC ACGCCGGGCC CTTCGAGCTG GCCCAGACCG TGACCCTCGA GGAACTCGAA CAGGCCCACG CCGAAGGTGG CAACGAAGCG CTCGATCGCT TCCTCATGCC TTCGGACAGT GGCCTGCAGG ACTGGCCGCT GATCGGCTTG TCCGAACACA GTGCGTTCTA CTGGCTGCAT GGCCAGGCGG TACGTGCTCC GGACGCGCCG CAATTTGGCA TGGTCCGGGT ACAGGATCAC AATGGTCGTT TCATCGGTAT CGGTGAAGTG AGCGAAGACG GGCGTATTGC GCCGCGTCGA CTGATTCGGT CGGAATGA
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Protein sequence | MAQVKRIRRN VSGIILLDKP LGFTSNAALQ KVRWLLNAEK AGHTGSLDPL ATGVLPLCFG EATKFSQYLL DSDKGYETVM QLGQTTNTAD AEGEVLQTRE VTVGRADIEA LLPRFRGPIS QIPPMYSALK RDGQPLYKLA RAGEVVEREA RSVTINHLEL LECEGTRARL SVGCSKGTYI RTLVEDIGEA LGCGAYVAEL RRTHAGPFEL AQTVTLEELE QAHAEGGNEA LDRFLMPSDS GLQDWPLIGL SEHSAFYWLH GQAVRAPDAP QFGMVRVQDH NGRFIGIGEV SEDGRIAPRR LIRSE
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