| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0722 |
|---|
| Symbol | rbfA |
|---|
| ID | 6109634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 796570 |
|---|
| End bp | 796968 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641620481 |
|---|
| Product | ribosome-binding factor A |
|---|
| Protein accession | YP_001747596 |
|---|
| Protein GI | 170719908 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0858] Ribosome-binding factor A |
|---|
| TIGRFAM ID | [TIGR00082] ribosome-binding factor A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.041956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAG AATACAGCCG TACCCAACGT ATCGGTGATC AGATGCAGCG CGAGCTGGCA
GAACTGATCC GCCGTGAAGT CAAGGACCCA CGCGTCGGCC TGGTGACCAT CACCGCCGTG
GACGTCAGCC GCGACCTGGG CCATGCCAAG GTCTTCATCA CCGTCATGGG TGAAGAAACG
CCGGACGCAG TGCAGCAGTC GCTCAAGGCG CTGAACAGCG CTGCCAGCTT CTTGCGCCTG
CACCTGGGCC GCTCGATGCA GCTGCGCAGC GTGCCGCAGT TGCACTTCCA TTTCGATGAG
AGCGTCAGCC GTGGTGTCCA CCTGTCGGCG CTGATCGAGC GTGCAGTGGC CGAAGACCGC
CTGCACAAGG ATACCGACGA GCAGGACACC AAGGAGTAA
|
|---|
| Protein sequence | MAKEYSRTQR IGDQMQRELA ELIRREVKDP RVGLVTITAV DVSRDLGHAK VFITVMGEET
PDAVQQSLKA LNSAASFLRL HLGRSMQLRS VPQLHFHFDE SVSRGVHLSA LIERAVAEDR
LHKDTDEQDT KE
|
|---|
| |