Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0710 |
Symbol | greA |
ID | 6109620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 783980 |
End bp | 784462 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641620467 |
Product | transcription elongation factor GreA |
Protein accession | YP_001747584 |
Protein GI | 170719896 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0264242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTA CCAAGTATCC GATGACCGTT CAGGGCGCTC GCGCCCTGGA AGAGGAACAC CTGTTCCTGA GCAAGACCGA GCGCCCGCGC CTGAGTCAGG CCATTGGCGA AGCACGCGAA CTGGGCGACC TCAAGGAAAA TGCCGAATAC CATGCCGCCC GTGAGGAGCA GGGCATGGTC GAGGCGCGTA TCCGCGACAT CGAAGGCCGT CTGCAGAACT CGGTAGTGAT CGATGTGACC ACTATCCCTC ACACCGGCAA GGTGATTTTC GGCACCACTG TGGTGCTGGC CAACACTGAA ACCGATGAAG AGGTGAGCTA CCAGATCGTT GGTGAGGATG AAGCCGACGT GAAGCAAGGC AAGCTCTCGA GCGGCGCACC GATCGCCCGT GCCATCATCG GCAAGGAAGA AGGTGATACT GTCGTCGTCA AGACGCCAAG CGGCTCGGTC GAGTACGAGA TTGTCGAAGT CAAGCACATC TGA
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Protein sequence | MSITKYPMTV QGARALEEEH LFLSKTERPR LSQAIGEARE LGDLKENAEY HAAREEQGMV EARIRDIEGR LQNSVVIDVT TIPHTGKVIF GTTVVLANTE TDEEVSYQIV GEDEADVKQG KLSSGAPIAR AIIGKEEGDT VVVKTPSGSV EYEIVEVKHI
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