| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0686 |
|---|
| Symbol | |
|---|
| ID | 6109595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 757539 |
|---|
| End bp | 758519 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641620443 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_001747560 |
|---|
| Protein GI | 170719872 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00180883 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000000101632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGG TGGGTAGACG CGATGGCCGC AATTTCGGTT ACGGCAGACA ATTGAGCTAC
GCAGGGCCGC AGGCGTTGAA AGACATGTTC GGCGGCGGCC ACCACGGCAC GGTCAAGGCG
CACTGTGATC GTTGGCAGGC ATTCGTGAAG TGGTGCCGCT CTGAACAGGG GCCGGGTATC
AATGATGCGC GGAAGATTGA TCGCAAAGTG TTGGTCGACT ACGCGGCGTA TCTGCGTGAC
GTGATTAGGC GCGGTGACCT CGCCGTCAGC ACCGCACAAA ACCGGCTATC CACCGTTAAC
AGGACCATGG CGGCGCTTCG CGGTGATCAG TATGTGAAAT TGCCCAGTCC GAGCAAGGCA
TTGGGTATGC AGCGCACAGG GGTTCGACAA TCGGTGCCAC AAGGCCAACA CCGTGATCAG
GTTAAAGAGA TCATCAATGC GCTTTGCCGC CATCGTCAGC TACGAGCCGC TGCGATCGTT
TTGATGGCAC GAGCCACTGG CATGCGTTTA CGTGAAGCCA TCTTGGCTGA CCTGTCACGG
CTAAGCCGTG AGGCTAACCA CCTAGGCAGG ATTAACATTC AGGACGGCAC CAAGGGCGGC
CGCGCCGGCG CCTCAGCACC ACGTTGGATT TCGCTGGATA AGCATGCTCT GGGCGCGCTT
AGATTTGCAG AGCGGGTGTC GCCTGCGGGC AGTCGCAACC TGATTGCGCC ACAAGAAAGC
TACTTTGACG TTCTGCAGGA CATCGTCCGC CCGGCACGGG ACATCCTGCA AACACACAAC
CTCAAAGGTT TCCATGAGTT ACGAGCGGCC TACGCATGTG AGCGCTATGA GCAAATAACC
CAACACCGCG CGCCTATCAA CGGTGGCCAC TTTTGCCAGG TAGGTAGGAA GCTTGATCGT
GAGGCCCGGA GGCAGATCAG CTATGAGCTG GGGCACGGTC GGATTGATGT TGTAGCTGCT
TACATTGGAG GGTGCGCATG A
|
|---|
| Protein sequence | MALVGRRDGR NFGYGRQLSY AGPQALKDMF GGGHHGTVKA HCDRWQAFVK WCRSEQGPGI
NDARKIDRKV LVDYAAYLRD VIRRGDLAVS TAQNRLSTVN RTMAALRGDQ YVKLPSPSKA
LGMQRTGVRQ SVPQGQHRDQ VKEIINALCR HRQLRAAAIV LMARATGMRL REAILADLSR
LSREANHLGR INIQDGTKGG RAGASAPRWI SLDKHALGAL RFAERVSPAG SRNLIAPQES
YFDVLQDIVR PARDILQTHN LKGFHELRAA YACERYEQIT QHRAPINGGH FCQVGRKLDR
EARRQISYEL GHGRIDVVAA YIGGCA
|
|---|
| |