Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0666 |
Symbol | |
ID | 6109575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 723730 |
End bp | 725073 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641620423 |
Product | d-galactonate transporter |
Protein accession | YP_001747540 |
Protein GI | 170719852 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0432694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCA AATCCGCCGT CGCCGCACCG CAGGCCGTCG CCGCAATCGG CCGCCATCGC TTCCTTGTCC TGGCGCTGAT CTTTGTCATC ACGGTCATCA ACTATGCCGA CCGCGCCACC TTGTCGATCA CTGGCACCGA GGTACTCAAG GACCTCGACC TGGACCCGGT CATGCTCGGC ATGATCTTCT CTGCCTTCGC CTGGGCCTAC GCCCTCGGCC AGGTGCCAGG CGGCTGGTTG CTGGACCGCT TCGGTGCACG CCGCGTGTAT GGCCTCAGCC TGATTCTCTG GTCGCTGTTC ACCCTGCTGC AAGGCACAGT GGGCTGGCTG GGCCTGGCCG GTGTGTCGGC TGCGGTGGCG TTGTTCTCCA TGCGTTTCAT GCTCGGCCTG GTGGAGTCAC CGGCATTCCC GGCCAACTCG CGCATCGTCA GTTGCTGGTT CCCCACCCGC GAGCGCGGTA CCGCATCGGC GCTGTTCAAC TCGGCGCAGT ACATGGCAGT GGTGGTGTTC GCGCCGCTGA TGGCGTGGAT GACCCACACG ATGAGCTGGG AGCAGGTATT CATCTGGATG GGCGTGCTCG GCCTGCTGCT GAGCGTGGTG TGGTTCCGCC TTTACCATGA GCCGCACAGC GCACCGGGGT TGAGCCGTGA AGAGTTCGAT TACATGCGTG AAGGCGGAGC GCTGGTCGAC CTGGAAAAAG AGCGCAAGAC GGCCAAGAGC AAACCGACCC GCGCGGAGCT TGCGCAGCTG TTCACCAGCC GCAACCTGTG GGCGGTCTAC CTGGGGCAGT ACTGCATCAC TGCGCTCACC TATTTCTTCA TCACCTGGTT CCCGATCTAC CTGATCAAGG GCCGTGGCAT GACCATCATG GAGGCCGGCT GGGTGGCCGC GTTGCCGGCG ATCTGCGGCT TTACCGGCGG CATCCTTGGG GGCTTCGTGT CCGACTGGCT GATCCGCCGT GGCGTGCACC CGTCCAGGGC GCGCAAGACG CCGTTCGTGA TCGGCATGGC GTTGTCCACC ACCTTGGTGC TGGCCAATTA CGTGGATGGC AACGCGGCGG TAATTGCCCT GATGACCTTG GCATTCTTCG GCAAGGGCCT GGCAGCGGTG GGTTGGGCGG TGCTGTCGGA TGTGGCACCG AAGAAAATGG TCGGCCTGTG CGGTGGCGTG TTCAACGGCA TCGGAAACAT TGCCGGCATC GTCACCCCGC TGGTGATCGG CTACGTAGTG GCCAGCACCG GCTCCTTCGA CAACGCACTT TGGTTCGTGG CCGCCCACGG CGTGCTGGGG ATCTTCGCTT ACCTGTTGCT GGCCCGGCGC TTCGAACGGA CGGGGCAGGC GTAG
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Protein sequence | MNSKSAVAAP QAVAAIGRHR FLVLALIFVI TVINYADRAT LSITGTEVLK DLDLDPVMLG MIFSAFAWAY ALGQVPGGWL LDRFGARRVY GLSLILWSLF TLLQGTVGWL GLAGVSAAVA LFSMRFMLGL VESPAFPANS RIVSCWFPTR ERGTASALFN SAQYMAVVVF APLMAWMTHT MSWEQVFIWM GVLGLLLSVV WFRLYHEPHS APGLSREEFD YMREGGALVD LEKERKTAKS KPTRAELAQL FTSRNLWAVY LGQYCITALT YFFITWFPIY LIKGRGMTIM EAGWVAALPA ICGFTGGILG GFVSDWLIRR GVHPSRARKT PFVIGMALST TLVLANYVDG NAAVIALMTL AFFGKGLAAV GWAVLSDVAP KKMVGLCGGV FNGIGNIAGI VTPLVIGYVV ASTGSFDNAL WFVAAHGVLG IFAYLLLARR FERTGQA
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