Gene PputW619_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0653 
Symbol 
ID6109562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp709743 
End bp710663 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content64% 
IMG OID641620410 
Producthypothetical protein 
Protein accessionYP_001747527 
Protein GI170719839 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.005138 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.609014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCT CCCGCCGCTT CCCGTTATTG CTGATTGGTG CCTTTCTGGC TTTGTATCTG 
GTCTGGGGCT CCACCTACCT GTTCATTCGC ATTGGTGTGG AGTCCTGGCC GCCGATGCTG
ATGGCCGGGG TGCGATTCCT TATCGCCGGG GGCCTGCTCT ATGGGTTTTT GCGCTGGCGC
GGGGTGCCGG CGCCGACCTG GCCGCAATGG CGTGCGGCAG GGGCCATCGG TTTTCTGCTG
CTCAGTTGCG GCAATGGTGG CGTGACGGTT GCAGAGCATG CTGGCGTTGC CTCCGGCGTC
GCTGCGCTGG CGGTGGCTAC TGTGCCGCTG TTTACCTTGG TGTTTGGCCT GCTGTTTGGC
CATCGCAATT CGCGCCTGGA GTGGGCGGGC ATCGTCCTTG GGCTGGTTGG CATCGGCCTG
CTCAACCTCG GCTCTAACCT GCAGGCCAGC CCCATCGGTG CGGCGCTGAT CCTGTTTGCG
GCTGCCGCCT GGGCGTTCGG ATCGGTCTGG AGCAAGAGCC TGCCGTTACC CCAAGGCCCC
ATGGCCAGTG CGGCCCAGAT GCTGGTCGGT GGTGCTGTAT TGCTGTTGGG CAGCGCCCTG
TCGGGTGAGC GCATGACTCA GATGCCCACT GCGGCAGGCT GGGGCGCATT GGCTTATCTG
GTCTTGTTCG GCTCGATCCT GGCATTCAGC GCCTACATGT ACCTGCTCAA GCATGTGCGC
CCGGCCGCGG CCACCAGCTA CGCCTATGTC AACCCGGCGG TTGCAGTGTT GCTTGGTATC
GTCTTTGCCG GCGAGCAGAT CGGCGCAGAG GAATGCCTGG CGATGGCGGT AATCATCAGT
GCCGTGGTGC TGATCGGCCT GCCGCAGTGG CGCAGGCCGG CGCAGCCCAC TGCATCGCTT
GAGGGCGAAA CCTGCAAGTA G
 
Protein sequence
MPASRRFPLL LIGAFLALYL VWGSTYLFIR IGVESWPPML MAGVRFLIAG GLLYGFLRWR 
GVPAPTWPQW RAAGAIGFLL LSCGNGGVTV AEHAGVASGV AALAVATVPL FTLVFGLLFG
HRNSRLEWAG IVLGLVGIGL LNLGSNLQAS PIGAALILFA AAAWAFGSVW SKSLPLPQGP
MASAAQMLVG GAVLLLGSAL SGERMTQMPT AAGWGALAYL VLFGSILAFS AYMYLLKHVR
PAAATSYAYV NPAVAVLLGI VFAGEQIGAE ECLAMAVIIS AVVLIGLPQW RRPAQPTASL
EGETCK