Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0648 |
Symbol | |
ID | 6109557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 704371 |
End bp | 706899 |
Gene Length | 2529 bp |
Protein Length | 842 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641620405 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_001747522 |
Protein GI | 170719834 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.242487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.649022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTCCT TACCAATCGA TGCTGCCCTG CCGGCTTTGC GCCATGCCTT GGAAAACCGT CACGAAGCGG TGCTCGAGGC GCCGCCCGGC GCAGGCAAGA CTACCCGTGT ACCGCTGGCA CTGTTGAATG AACCCTGGTT GGCCGGGCAA ACCATCGTGA TGCTGGAGCC GCGCAGGTTG GCGGCGCGTG CGGCGGCAGA ACGGCTGGCC AGTGAGCTGG GCGAGAAAGT CGGTGAAACG GTGGGTTACC GCATTCGCCT GGACAGCAAG GTCGGGCCCA ATACCCGTAT CGAAGTGGTC ACCGAAGGCA TCCTGACCCG CCGGTTGCAG GCAGACCCTG CGCTGGAGGG CGTAGGGCTG CTGATCTTCG ATGAGTTTCA CGAGCGTAGC CTGGATGCCG ACCTGGCCTT GGCGCTGAGT CTCAATGGCC GGGAGCTGCT GCGCGACGAT CCGCCGCTGA AAATTCTGCT GATGTCCGCA ACCCTGGAGG GCGAGCGCCT GTCCCGCCTG CTCGACGACG CGCCGGTGAT CAGCAGCGAA GGCCGCATGT ACCCGGTTGA TATTCGTTGG GGCCGGCCGT TCCAGCCAGG GGAATTCATC GAGCCGCGGG TGGTGGACAG CGTGCTGCAG GCCTTGGCCG ATCAACCCGG CAGTGTGCTG GTGTTCCTCC CCGGCCAGGC TGAGATCCGC AGGGTTCACC AACGTTTGCA GGAATCATTG GCCGAGCGCC CGGACATTCT GCTGTGCCCC TTGCATGGCG AACTCGACCT CAATGCCCAG CGTGCGGCCA TCGATCCGGC GCCCCAGGGC CTGCGCAAGG TCGTTCTGGC CACAAACATC GCCGAGACCA GCCTGACCAT CGACGGTGTG CGCGTGGTCA TCGATGCCGG CCTTGCCCGG GTACCGCGTT TCGACCCCGG CAGCGGCATG ACGCGCCTGG ACACCCAGCG TATCTCCCGT GCCAGCGCCA CCCAGCGGGC TGGCCGTGCG GGGCGCCTGG AACCGGGCGT TTGCTACCGC CTGTGGTCAG AGACCCAGCA CGACCAGTTG GCAGCACATG GCAGTGCCGA AATCCTCCAG GCAGACCTGG CGGGCCTGGC GTTGCAGCTT GGTCGATGGG GTGTTGCGCC TGACCAGTTG CGCTGGCTGG ACCAGCCTCC AGCGGCGGCA TTTTCCCAGG CGCAGGACCT GCTGGCGCGG CTTGGCGCTT TCAAGCTGGG CAGCCGCGAT AACCTCAGTG AACACGGCCA GGCCATGGCC GAGCTTCCGG CTCACCCGCG TATCGCTCAC CTGCTGCTGC GCGGCCAGGA TCTGGGCTTG GCCGCGATGG CCTGCGATGT TGCCGCCTTG TTGGGCGAGC GCGATATCCA GCGCGCAGGT GGCGCCGACC TGCATAGCCG GCTGGCACTG ATCAGCGGCG ACAGCAAGGT CAGCCGTGAC GCCCAGGGAG GTGTGCAGCG TGCCCGGCAG TTGGCCCGCC AGTACCGGGG GCTGCTGCGC GGCAAGGCCA GGGCGGGGGT TGCCGATCCC GAGCATCCAC GCTGGCTCGG CGCCCTGCTG GCGTTGGCCT ATCCCGACCG GGTTGCCCAG CAGCGTCGCG AAGGCGGGGC CGAGTACCGC CTGGCCAACG GCCGTGCTGC TTTGTTCGCC GAGGCCGATG CGCTGATGAA ATGCCCGTGG TTGGTCATCG CCGACCTGGG CAGCCGCCAG GGGCAGCGGG AGGAGCGGAT TTACCTGGCT GCCGAATTCG ACCCGGCGCT GCTCGACGAT GTGCTGGCCG AACAGGTCGA GCGCGTCGAC ATTCTCGACT GGGACGAGCG CGAGCAGGTG TTGCGTGCCG AGCGTCAGAC CAAGGTCGGC GAACTGGTGC TCAGCCGTGA ACCGTTGCCT GGGCTGGATG ACGACGCCCG CGCCAGGGCA CTGCTAGGCT TGGTGCGGCG CAAAGGCCTG AACCTGCTGA GCTGGACGCC AGAGCTACGC CAGTGGCAGG CGCGCATAGC GCTATTACGC CAGCTAGACC TGGAAAAAGA CGGCCATAGC GAGTGGCCCG ACCTAAGCGA CGAGGCGCTA CTGGCCAGCC TGGAGCACTG GCTGCAGCCT TATCTGGGCA AAGTGTCCCG GCTGAGCCAT TTCGCCGCCC TGGACCTGCC TTCGATCTTG CGTAATCTGT TGCCCTGGCC GCTGCCCCAG CGCCTGGACG AATGGGCGCC AGCGCACCTG GCTGTGCCGT CGGGCTCCAG TATCCGCCTC GACTACAGTG AAAACCCGCC GATCCTCGCC GTGCGCCTGC AAGAGCTGTT CGGCCTGGCT GACACACCGC GCATCGCCCA AGGTCGCCAG CAGGTCAAGC TGCATCTGCT GTCGCCAGCG CGGCGGCCAG TGCAGGTGAC GCAGGACTTG GCCAGCTTCT GGCGCACCAC CTATGCAGAG GTGAAGAAGG ACCTCAAGGG TAGATACCCC AAGCATTACT GGCCGGACGA CCCGCTGGTG GCTGAGGCCA CCGCGCGGGC AAAACCGCGT GGCACCTGA
|
Protein sequence | MISLPIDAAL PALRHALENR HEAVLEAPPG AGKTTRVPLA LLNEPWLAGQ TIVMLEPRRL AARAAAERLA SELGEKVGET VGYRIRLDSK VGPNTRIEVV TEGILTRRLQ ADPALEGVGL LIFDEFHERS LDADLALALS LNGRELLRDD PPLKILLMSA TLEGERLSRL LDDAPVISSE GRMYPVDIRW GRPFQPGEFI EPRVVDSVLQ ALADQPGSVL VFLPGQAEIR RVHQRLQESL AERPDILLCP LHGELDLNAQ RAAIDPAPQG LRKVVLATNI AETSLTIDGV RVVIDAGLAR VPRFDPGSGM TRLDTQRISR ASATQRAGRA GRLEPGVCYR LWSETQHDQL AAHGSAEILQ ADLAGLALQL GRWGVAPDQL RWLDQPPAAA FSQAQDLLAR LGAFKLGSRD NLSEHGQAMA ELPAHPRIAH LLLRGQDLGL AAMACDVAAL LGERDIQRAG GADLHSRLAL ISGDSKVSRD AQGGVQRARQ LARQYRGLLR GKARAGVADP EHPRWLGALL ALAYPDRVAQ QRREGGAEYR LANGRAALFA EADALMKCPW LVIADLGSRQ GQREERIYLA AEFDPALLDD VLAEQVERVD ILDWDEREQV LRAERQTKVG ELVLSREPLP GLDDDARARA LLGLVRRKGL NLLSWTPELR QWQARIALLR QLDLEKDGHS EWPDLSDEAL LASLEHWLQP YLGKVSRLSH FAALDLPSIL RNLLPWPLPQ RLDEWAPAHL AVPSGSSIRL DYSENPPILA VRLQELFGLA DTPRIAQGRQ QVKLHLLSPA RRPVQVTQDL ASFWRTTYAE VKKDLKGRYP KHYWPDDPLV AEATARAKPR GT
|
| |