| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0646 |
|---|
| Symbol | |
|---|
| ID | 6109555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 702939 |
|---|
| End bp | 703808 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641620403 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_001747520 |
|---|
| Protein GI | 170719832 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.186266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCT CGGCTGAACA CCAGCGCCTG CTACGCCTGG CCACCCGCGC GTCGCTCGCA
GTGGCCAGCA TCCTAGTACT GAGCAAGGCC GTGGCCTGGT GGCTGAGTGG CTCGGTCAGC
CTGCTGGCCG GGCTGACCGA TTCGGCGCTG GACGCGGTCG CCTCGTTCCT CAACCTGCTC
GCAGTGCACT ATGCGCTACG CCCGGCTGAT GATGACCATC GCTTCGGCCA CGGCAAGGCA
GAAGCCTTGG CAGGCATGGC CCAGGCGGTG TTCATCGGCG TGAGTGCGGT ACTGATCGGG
GTTCAGGCCG CCGAGCGCCT GCAATCACCA CAGCCCCTGG GGGACACTGC AATCGGTATC
GGCGTGATGC TGCTGTCGCT GGTACTGACG CTCGCCTTGC TGGCACTGCA ACGCAAGGTG
GTGCGCGTAA CAGGCTCAAC AGCGGTGCGT GCCGACTCGC TGCATTATCG CTCTGACCTG
CTGCTAAATG GCAGCATCCT GCTGGCCTTG CTGCTGGCAC GCTACGGCTG GCCGCAGCTG
GATGCGCTGT TTGGCCTGGG TATCGCGCTG TACATCCTGT GGAGTGCACT GCAGATCGCC
CGGGAAAGCA CGGCAATCCT GATGGACAAG GAACTGCCCG GCGACATCGG CGAGGGCATG
GTCGAACTGG TGCTGGGCAT TGCCGGGGTC AAAGGTGTGC ATGACCTGCG CACCAGGGTG
TCGGGCAATC AGTGGTTCGT GCAACTGCAT CTGGAGCTGC CTGGGCAGTT GCCGTTGCAC
GAAGCACATG CCCTGTGCGT CCAGGCCTCT GAAGTCATCC GCCAGCGTTA TCCTCAGGCG
GATGTGATGG TGCATGCCGA CCCCGTCTGA
|
|---|
| Protein sequence | MITSAEHQRL LRLATRASLA VASILVLSKA VAWWLSGSVS LLAGLTDSAL DAVASFLNLL
AVHYALRPAD DDHRFGHGKA EALAGMAQAV FIGVSAVLIG VQAAERLQSP QPLGDTAIGI
GVMLLSLVLT LALLALQRKV VRVTGSTAVR ADSLHYRSDL LLNGSILLAL LLARYGWPQL
DALFGLGIAL YILWSALQIA RESTAILMDK ELPGDIGEGM VELVLGIAGV KGVHDLRTRV
SGNQWFVQLH LELPGQLPLH EAHALCVQAS EVIRQRYPQA DVMVHADPV
|
|---|
| |