Gene PputW619_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0613 
Symbol 
ID6109522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp669165 
End bp669632 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID641620370 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_001747487 
Protein GI170719799 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCTGC GCCTGATCGC GGTCGGCTCG CGCATGCCCA AGTGGGTCGA GGAAGGCTGG 
CATGAATATG CCAAGCGCCT GCCACAAGAG CTGTCGCTGG AGCTGGTGGA AATTCCGCTG
AACACCCGTG GCAAGAATGC CGACGTCGCC CGCCTGATTC GTCAGGAGGG TGAGGCCATG
CTGAGCAAGG TTCAGCCTGG GGAACGCATC GTCACCCTCG AGGTCCATGG CAAGCCCTGG
AGCACCGAGC AATTGGCGAC CGAGCTGGAC CGCTGGCGGC TGGACTCGCG CACGGTGAAT
TTGATGGTGG GCGGCCCGGA AGGGCTGGCG CCTGAGGTTT GTGCGCGCGC CGAGCAACGC
TGGTCGCTGT CGCCGCTGAC CTTGCCGCAC CCGTTGGTAA GGATACTCAT CGGCGAGCAG
ATCTACCGCG CCTGGACAGT GTTGTCCGGG CACCCTTACC ACAAATGA
 
Protein sequence
MRLRLIAVGS RMPKWVEEGW HEYAKRLPQE LSLELVEIPL NTRGKNADVA RLIRQEGEAM 
LSKVQPGERI VTLEVHGKPW STEQLATELD RWRLDSRTVN LMVGGPEGLA PEVCARAEQR
WSLSPLTLPH PLVRILIGEQ IYRAWTVLSG HPYHK