| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0598 |
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| Symbol | |
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| ID | 6109507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 655332 |
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| End bp | 657317 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620355 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001747472 |
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| Protein GI | 170719784 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCC ACCACCTCAG TCGTCATGCC CAGCAAGTGC ATACCGTTGC CCACGGCGAA
GCCGGCGGTG CCGGCAGCGA CCCGTCCATT GCCCGCTCCT GGCTGCGATG CCTGGAGGAC
TACCATCTTG ATCCCGAGGT GCTTGCGGCG CCGGTCGTGC TGGAACACGG CCGCCTGCTC
GAAAGCCGTG AGCGCCTGAA CCAGGTGCTG AAAATCGCCG ATAATGAAAT GAACAGCTTG
CACCAGCAGC TATCAGGTGC CGGGCACGCG GTCCTGCTTA CCGATGCGCG CGGTGTCATC
CTCAACTGTG TCACCGCACC CAGCGAACGG CGCATTTTCG AACGTGCGGG GTTGTGGTTG
GGCGCTGACT GGAGCGAGGC GCGCGAAGGC ACCAATGGCA TCGGCACATG TCTGGTCGAG
CGCCAGGCGC TGACCATCCA TCAGAACGAA CACTTTCGCG GTCGTCATAC CGGGCTGACC
TGTTCGGCCA GCCCGGTATT CGACCCGCAT GGCGAGCTGC TGGCAGTGCT CGATGTGTCA
TCGGCGAGGC CGGATGTCTC GCGTCAGAGC CAGTTTCATA CCATGGCGCT GGTCAACCTC
TCGGCGAAGA TGATCGAGAG CTGTTATTTC CTGCGCCACT TCGAACAGCA ATGGTTGCTG
CGCTTTCACC TGCAGGCCGA GTCGGTGGGG TTGTTCAGCG AAGGGCTGCT GGCTTTCGAT
GCCGATGGCC GTATCTGCGC GGCCAACCAG AGCGCCCTCA ACCTGCTGGG CACCATCCGT
GGCGGGGTGC TGGGCAAGCC GCTGGAAATG TTCTTTGCCT GTAACCATGA TGAGCTCTTC
AGCCGCGCCA TGCCCAATGG CAGCCCGGCC TGGCCGCTGT ATACACGTGA TGGTCGGCAG
GTATTTGCCA GCTTGCGGGG TCAGGCGAAG GCACCGGTGT GGGCGGTGCC GGCTGGTTTG
CCCGAAGCCC GGCCAGAGGC TGCCCCCGGA ATTTGTCTGA TGGACCCGGC GCTGCAAGGT
GACTTCCTGC GTGCGCTGCG GGTCTTCGAG CGTGATGTGC CACTGCTGGT GTCGGGCGAG
ACCGGCTGTG GCAAAGAAGC CTTTGCCCAG GCAGTGCACC AGGCTAGCCA GCGGCGCGGC
AAGCCGTTCG TGGCAGTCAA CTGCGCCTCG ATTCCTGAAA GCCTGATAGA GAGCGAGTTG
TTCGGTTACC GCGGCGGCAG TTTTACCGGG GCGCGCAAGG AGGGCATGCG CGGCAAGCTG
CTGCAGGCCG ATGGCGGCAC ATTGTTGCTC GACGAGATCG GTGACATGCC GCTGGCGCTG
CAGACCCGCC TGCTACGCGT GCTGGAAGAA CGCCAGGTGG TGCCGATCGG CGGTGAGCCG
CAAGCGGTCG ATGTGCGGAT CGTCAGTGCT ACCCACCGCG ACCTGCTTGA GCGAGTGGAG
CAGGGCACAT TCCGCGAGGA CCTCTATTAC CGGCTCAATG GCTTGGAAGT GGCAATGCCG
GCGGTGCGCG AGCGTAGTGA CAAGGCTCAG TTGCTGGATT TCCTGTTGCG ACAGGAAGCG
CAAGGCCAGG CCATCGAAAT CGAGCCAAGC GCCCGCCAGG CGCTGCTGGA TTTTGCCTGG
CCGGGCAATG TGCGCCAGAT GCGCAACGTG CTGCGTACGT TGGTGGCATT GTGTGAGGAT
TGTCATGTCG CGTTTGCGGA TCTGCCCGCA ATCGTGCGCA ACACCTCCAG CCCTGTAGGG
GCGGCCTTGT GTCGCGAAAG GACCGGTGAG CGGCCCCAGG ATTTCGATAA CGCTGCCCAG
TTTGCGGGGG CCGCTTCGCA GCCCTTTCGC GACACAAGGC CGCTCCTACA GGCGGAGGGC
CAGGCCCTGT TGTCCGTATT GGAGGCAAAC CGCTGGCACC TGACCCGTGT CGCCGAGCAT
TTGGGTATCA GCCGCAATAC CTTGTATCGA AAACTGCGCA AACACGGCAT CGCCAGGGGC
GTTTGA
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| Protein sequence | MQSHHLSRHA QQVHTVAHGE AGGAGSDPSI ARSWLRCLED YHLDPEVLAA PVVLEHGRLL
ESRERLNQVL KIADNEMNSL HQQLSGAGHA VLLTDARGVI LNCVTAPSER RIFERAGLWL
GADWSEAREG TNGIGTCLVE RQALTIHQNE HFRGRHTGLT CSASPVFDPH GELLAVLDVS
SARPDVSRQS QFHTMALVNL SAKMIESCYF LRHFEQQWLL RFHLQAESVG LFSEGLLAFD
ADGRICAANQ SALNLLGTIR GGVLGKPLEM FFACNHDELF SRAMPNGSPA WPLYTRDGRQ
VFASLRGQAK APVWAVPAGL PEARPEAAPG ICLMDPALQG DFLRALRVFE RDVPLLVSGE
TGCGKEAFAQ AVHQASQRRG KPFVAVNCAS IPESLIESEL FGYRGGSFTG ARKEGMRGKL
LQADGGTLLL DEIGDMPLAL QTRLLRVLEE RQVVPIGGEP QAVDVRIVSA THRDLLERVE
QGTFREDLYY RLNGLEVAMP AVRERSDKAQ LLDFLLRQEA QGQAIEIEPS ARQALLDFAW
PGNVRQMRNV LRTLVALCED CHVAFADLPA IVRNTSSPVG AALCRERTGE RPQDFDNAAQ
FAGAASQPFR DTRPLLQAEG QALLSVLEAN RWHLTRVAEH LGISRNTLYR KLRKHGIARG
V
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