Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0570 |
Symbol | ribH |
ID | 6109479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 628055 |
End bp | 628567 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641620327 |
Product | 6,7-dimethyl-8-ribityllumazine synthase |
Protein accession | YP_001747444 |
Protein GI | 170719756 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0054] Riboflavin synthase beta-chain |
TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGGCC TCGCTCTTGA AGATGAGAAC ATCGGAATGA CCCTGAAGAC CATCGAAGGT ACCTTCATTG CCCCCAAAGG TCGCTATGCT TTGGTGGTTG GCCGCTTCAA CAGCTTCGTC GTAGAAAGCC TGGTGAGCGG TGCCGTTGAT GCCCTGGTAC GCCACGGTGT CAGCGAAAGC GACATCACCA TCATCCGTGC GCCGGGCGCG TTCGAAATCC CGCTGGTGGC TCAGAAAGTC GCCCAGCAAG GTGAATACGA CGCGATCATC GCCCTGGGTG CAGTGATCCG TGGCGGTACC CCGCACTTTG AATACGTGGC GGGCGAATGC ACCAAGGGCC TGGCCCAGGT GTCCATGGAG TTCGGTGTGC CGGTGGCCTT CGGTGTCCTG ACCGTCGACT CCATCGAGCA AGCGATCGAA CGTTCCGGCA CCAAGGCCGG TAACAAAGGT GCTGAAGCTG CCCTGTCCGC TCTGGAAATG GTCAGCCTGC TGGCGCAGTT GGAGGCCAAG TGA
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Protein sequence | MRGLALEDEN IGMTLKTIEG TFIAPKGRYA LVVGRFNSFV VESLVSGAVD ALVRHGVSES DITIIRAPGA FEIPLVAQKV AQQGEYDAII ALGAVIRGGT PHFEYVAGEC TKGLAQVSME FGVPVAFGVL TVDSIEQAIE RSGTKAGNKG AEAALSALEM VSLLAQLEAK
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