Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0522 |
Symbol | |
ID | 6109430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 577279 |
End bp | 578757 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620278 |
Product | sodium/proline symporter |
Protein accession | YP_001747396 |
Protein GI | 170719708 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.550728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0854838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAATC CACTAACGAT CACTTTCGTG ATCTATATCG CGGTAATGGT ACTGATCGGC TTCGCCGCCT ATCGCTCCAC CAAGAACCTT TCCGATTACA TTCTGGGCGG CCGCAGCCTG GGTAGCGTTG TCACCGCGCT TTCCGCTGGT GCTTCCGACA TGAGCGGCTG GCTGCTGATG GGCCTGCCGG GCGCCATCTA CTTTTCAGGC CTGTCCGAGG CCTGGATCGC CATCGGCCTG ACCGTCGGTG CCTACCTCAA CTGGCTGTTC GTCGCTGGCC GTCTGCGCGT GCAGACCGAG CACAACGGCG ATGCGCTGAC CCTGCCGGAC TACTTCTCCA GCCGCTTCGA AGACAGCAGC GGCCTGCTGC GGATCATTTC GGCCATCGTC ATCCTGGTGT TCTTCACCAT CTATTGCGCC TCCGGTATCG TCGCCGGCGC CCGCCTGTTC GAAAGTACCT TCGGCATGTC GTACGAGACT GCGCTGTGGG CCGGTGCTGC GGCTACCATC GCCTACACCT TCATCGGTGG CTTCCTGGCG GTGAGCTGGA CAGACACCGT GCAGGCCTCG CTGATGATCT TCGCGCTGAT CCTGACCCCG ATCATCGTGC TGATCTCCAC GGGCGGCTTC GACACGACCT TCCTGGCCAT CGAAGCGCAG AACCCGGCGC ACTTCGACAT GCTCAAGGGC GCGACCTTCA TCGGCATCAT TTCGCTGATG GGCTGGGGCC TGGGCTACTT CGGTCAGCCG CACATCCTGG CGCGCTTCAT GGCCGCTGAT TCGGTCAAAT CGATCGCCAA CGCCCGCCGC ATCTCCATGA CCTGGATGAT CCTGTGCCTG GTCGGTACCT GCGCCGTGGG CTTCTTCGGT ATCGCTTATT TCTCCGCTCA CCCTGAGCTG GCCGGCCCGG TCACCGAGAA CCACGAGCGT GTGTTCATCG AGCTGGCGAA GATCCTGTTC AACCCTTGGG TAGCCGGTGT GCTGCTGTCG GCCATTCTGG CCGCGGTGAT GAGTACCTTG AGCTGCCAGT TGCTGGTGTG CTCCAGTGCG CTGACCGAAG ACTTCTACAA GGCCTTCCTG CGCAAGAATG CCTCGCAGCG TGAATTGGTC TGGGTCGGTC GCCTGATGGT GCTGGCCGTG GCCCTGATCG CCATCGCCAT GGCTGCCAAT CCGGAAAACC GCGTGCTGGG CCTGGTGGCC TACGCCTGGG CCGGCTTTGG TGCCGCCTTC GGTCCGGTCG TGTTGATCTC GGTGCTGTGG AAAGGCATGA CCCGTAACGG CGCGCTGGCC GGTATCGTGG TCGGTGCACT GACCGTGATC CTTTGGAAAC AGTTCGACAC CATCGGGTTG TACGAAATCA TCCCGGGCTT CCTGTTCGCC AGCATCGCCA TCGTCGTGGT GAGCAAGCTC GGCAGCCCGT CGAACAGCAT GGTTTCGCGC TTTGAAACCG CTGATGCCGC GTATCACGCT GAAAAGTAA
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Protein sequence | MGNPLTITFV IYIAVMVLIG FAAYRSTKNL SDYILGGRSL GSVVTALSAG ASDMSGWLLM GLPGAIYFSG LSEAWIAIGL TVGAYLNWLF VAGRLRVQTE HNGDALTLPD YFSSRFEDSS GLLRIISAIV ILVFFTIYCA SGIVAGARLF ESTFGMSYET ALWAGAAATI AYTFIGGFLA VSWTDTVQAS LMIFALILTP IIVLISTGGF DTTFLAIEAQ NPAHFDMLKG ATFIGIISLM GWGLGYFGQP HILARFMAAD SVKSIANARR ISMTWMILCL VGTCAVGFFG IAYFSAHPEL AGPVTENHER VFIELAKILF NPWVAGVLLS AILAAVMSTL SCQLLVCSSA LTEDFYKAFL RKNASQRELV WVGRLMVLAV ALIAIAMAAN PENRVLGLVA YAWAGFGAAF GPVVLISVLW KGMTRNGALA GIVVGALTVI LWKQFDTIGL YEIIPGFLFA SIAIVVVSKL GSPSNSMVSR FETADAAYHA EK
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