| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0514 |
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| Symbol | |
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| ID | 6109422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 563919 |
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| End bp | 565346 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641620270 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001747388 |
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| Protein GI | 170719700 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.507983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.797447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAC GCACTCCGCT GGACCCTGTC ACCGCCCGCT GGCTCCCCTG GGTTGTGGCG
ATCGCTTTCT TCATGCAGTC CCTGGACGGC ACCATCCTCA ACACCGCACT GCCGGCCATG
GCCCGCTCGC TCGAAGAAAA CCCGCTGCGC ATGCAGGGTG TGATCATCGC CTACATGCTC
ACCGTGGCCC TGCTGATTCC TGCTTCGGGC TGGATCGCTG ACCGCTTTGG CACCAAGCGC
ATCTTTTTCA GCGCCATCTT GCTGTTCAGC TTCGGCTCGC TGCTATGTGC CATGGCCAAC
AGCCTGGGCT TTCTGATTTT CGCCCGCGTG GTGCAGGGCC TGGGCGGCGC ACTGATGCTG
CCGGTCGGGC GGCTGGTGGT ACTGCGTGCC TATCCACGCA GCGAACTGGT GCGGATCATG
AGCTTCATCA CCATCCCCGG CCTGTTGGGC CCGCTGCTAG GCCCGACGTT GGGCGGCTGG
TTGGTCGAGA TCCTCACCTG GCACTGGATA TTCCTGCTCA ACCTGCCCGT GGGCGCGCTG
GGCTGTTACG CCGTGTGGAA GTTCATCCCC GACCTGCGCG GTGCCGAACG CACCACCTTC
GATGGCCCCG GCTTCATCCT GTTCGGCGCG GCGATGGTGC TGATCACCAT CGCCATGGAA
GGCCTGGGCG AATTGCACCT GCCGCACCTG CGGGTGATGC TCCTGTTGTT CGCCGGCATG
GCCTGCCTTG CGGCTTACTG GCTACGCGCC GGGCGCGATC CCGAACCACT GTTCTCGCCC
AGCCTGTTCC GCGTGCGCAC CTTCGCCATC GGTATTCTGG GCAACCTGTT CGCACGCCTG
GGCAGCGGCG CCCTGCCCTT CCTGGTGCCG TTGCTGCTGC AGGTGGCGCT GGGCTATTCG
CCGGCGCAGG CCGGCATGAG CATGATCCCG CTGGCGGCGG CGGCAATGGT CGCCAAGTCC
GTAGCCCGGC CGCTGATCGA ACGCCTCGGT TACCGCATCG TCCTCACCGG CAACACCGTG
CTGCTCGGCC TGCTGCTGGC CAGCCTGGGG CTGGTCGACG GGCAGACCCC GTATGCCGTA
CTGCTGGTGC AACTGGCCCT GCTGGGCGCC GTGAACTCCA TGCAGTTCAC CGCCATGAAC
ACGGTAACCC TGATCGACCT CGACGATGCC AGCGCCAGCA GCGGCAACAG CCTGCTGTCG
GTGGTCGCGC AGCTGTCACT GAGCCTGGGC GTGGCCTGCG CAGGCGCACT GCTGGGCGGT
TTCACTGCAG CCGGCAATGC CGATGGTGTA GAAACCACCT TGGGCGCCTT CCAGCTGACC
TTCGTGACCA TCGGTATCAT GGCCATGCTG GCGGCAGCGA TATTCCTGCA GCTGTCGCCG
ACAGACGGAA GGCGTGCCCG TCGTCCGGAA CAGCACATGG AGTCTTAG
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| Protein sequence | MPERTPLDPV TARWLPWVVA IAFFMQSLDG TILNTALPAM ARSLEENPLR MQGVIIAYML
TVALLIPASG WIADRFGTKR IFFSAILLFS FGSLLCAMAN SLGFLIFARV VQGLGGALML
PVGRLVVLRA YPRSELVRIM SFITIPGLLG PLLGPTLGGW LVEILTWHWI FLLNLPVGAL
GCYAVWKFIP DLRGAERTTF DGPGFILFGA AMVLITIAME GLGELHLPHL RVMLLLFAGM
ACLAAYWLRA GRDPEPLFSP SLFRVRTFAI GILGNLFARL GSGALPFLVP LLLQVALGYS
PAQAGMSMIP LAAAAMVAKS VARPLIERLG YRIVLTGNTV LLGLLLASLG LVDGQTPYAV
LLVQLALLGA VNSMQFTAMN TVTLIDLDDA SASSGNSLLS VVAQLSLSLG VACAGALLGG
FTAAGNADGV ETTLGAFQLT FVTIGIMAML AAAIFLQLSP TDGRRARRPE QHMES
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