Gene PputW619_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0476 
Symbol 
ID6109384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp519123 
End bp524012 
Gene Length4890 bp 
Protein Length1629 aa 
Translation table11 
GC content64% 
IMG OID641620232 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001747350 
Protein GI170719662 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAG CAGTAAGCCC TGAGCGCCAC GATACCGTCG CCCTCGCCTG GACCAAGGCG 
GCCATCCTCG ATTGCCTGGG GCGGGCGCGT CAGGCCCTTG AGCGCTTTGC CGGGGAGACG
GACGATTTGT CCATGCTGGC GTTCGTGGTG GATAACCTGC ACCAGGTTCA CGGCTGCCTG
CGCATGCTCG AACTGCGCGG TGCCACGCGC CTGGCCGAAG AGCTGGAGTT GCTGGCCAGG
GCCTTGGCCG AGGGCCAGGT AAGCCCCCGC GGCGACTGCC TGGGCCCGCT GTTCCGCGGC
CTTGAGCAAC TACCCTCGTA CCTGGAGCGG CTGCGCGGTG CGCGGCATGA CCTGCCTTTG
GTCATGCTGC CGCTGCTCAA CCAGTTGCGG GCTTGCCGGG GTGTCGAACC GTTGGCCCAG
GGCAGCCTGA TCAGCGGAGC GGCGCAGCGC TTTGCAGGCT CGGACGACCT GGCCAATCTC
GACCTGTCGC TGGGCAATTG GCGTGAGCAG GTTCAGGCAG GGCCTGGGCG TGATGCCCTG
CGTTCGGTGA TCAGCGCCTT GTGCGACGAC CTGATGCGCA TCAAGGAGCG TCTGGACCAG
TTCGTACGCG GGGATCGTCA GCACAGCGAA CAGCTGGACA GCCTGTTGGC CCCCTTGCGT
CATGTGGCTG ATACCCTTGC GGTCCTGGGC TTTCAGCAGC CTCGGCGGGT CATCATCGAT
CAGGTATTGG CCCTGCAGGC GTTGGCCCAA GGCCAACGCG TGGCGGATGA CGCCGTACTC
ATGGATGTGG CGGGTGCCTT GTTGTATGTG GAGGCGAGCC TCAATGGCAT GGTCGGCCCG
CTGGATGAAG GCGGGCAGGG GGGCTTGCCC GGTTCGGACC TGGCCGAGAT TCGCCAACTG
GTGTTGAACG AATCGCTGAA CGTGTTGCAG CAGGCCAAGG ACCTGATCGG AGATTGCCTC
GAGTCCGGTT GGCCGCGTCA GCGCCTGCAA CCACTGCCGG GGTTGCTGCA GCAAGTACGA
GGGGCGTTGG CGATGCTGAT GCTGCCGGCA GCTGCCGAAG TCTTGGCCGG ATGTGCGGGT
TACGTGCACG GCTGGTTACA GCACTTGGAC GTCGAGCCGC CGCCGGATGA GCTTGACCAC
CTGGCCGATG CCCTCAGCGC CAGTGAGTGT TACCTGCAAT GGCGGGTGGC CGACCCTCTG
GCCGATGCCC AGCCTTTCCT CGACAGGGCG CGCGTCAGCC TGGCGGCGCT CGGTGTGCAG
TGCACGCTTG GCGAAAGCGT CATTGCCCAG GACGGCAGCA CCGACGGGGT TGATGACGAG
TTGCGCGAGG TCTTCCTTGA AGAGGCCGGC GAGCTGCTGC CGCAGATCGA GCGGCATTGG
TTGCGCTGGC GCGCCGATAA CAGCCTGCGG GATGCCTTGC TGGAGGTGCG CCGGGACCTG
CATACGCTCA AAGGCAGTGG CCGCATGGTC CACGCCCAGG CGGTGGCCGA GTTGGCCTGG
GGCGGTGAGC ATTTGCTCAA CCGGGTACTC GAAGGGCGTA TGGCGCTGGC CCCGGAGGGT
GTGGTGGCCC TGCAGCAGGT AGTGGTTCAT TTGCCTGATC TGCTGGCCGA CTTTGCCGCC
GGCCAGATGC CACAGGTGAC CGAAATTGAG CAACTGGCGA GCCATCTGCA TGCGCTGGCG
GAAAACGATT CGCCGGCAGG TGCCGAAATC GATGGCCTGG ATCCGCTGTT GCTGGACATC
TTCCGCAATG AAGCGCAGGG CCATCTGGCC AGCCTGGAGG CATTTTTGCA GGGCGCCGGC
GGCCATGACA CCGATGTCAG CGATACCCTT CAACGCGCCT TGCATACCCT CAAAGGTAGC
GCTGCGATGG CCGGCGTATT GCCGATCGCC GAGCTGGCCA CCGCGTTCGA CCGGCTGGTA
CGCGAATACC GGGGCCACCA CTTGCCTTTG CAAATGGCCG AGCTGGAATG GCTGGAAGCG
GCACGCGCAC TGTTGCACCT GAGCCTCGCG CAATTGGGCA GCAGCCCGCT GGCTCCCATT
CCGGGCGCGG CGGAGTTGAT CGAGCAGGTC GGTGAGGCCG TGGACATGCG CTTGGCCAGC
TTGCATGACG AGCCGCAGCA TGGGCGGCGG GGCAAGCGTG ACCCACAGTT GATCGCCAGC
TTCCTGGCCC AGTCGATGGA CATTCTGCTG GATGCCGAGG CCCTGTTGTC ACGCTGGCAG
GAGCAGCCTG GGCAACGCCA GTCGCTGGAC AGCTTGCTCG ATGAGCTGAC CACCCTCTGT
CACGGTGCGC ACCTGGCCGA CCTGAGGCAG ATGGACGATG TCTGCGAAGC ATTGCTGGAT
CTGTATGGCG CGGTGGAAGA GGGCAGCCTT GCTGCCGATG AACGCTTCTT CGCCCAGGCA
CGGCAAGCCC ATGGGGTACT CCTCGACATG CTCGACGAGA TCGCTGCCGG CCAGGAACCG
TCCGCCCGCC CAGACTGCAT CGATGGCTTG CGTGGCTTGC TGGACGACGC CCTGGCACCC
GATGCCACCG GCCTGGTGGC ACCCGGGTCG GTCACGCGCC TCGATGGTCC CCTGGCGCTG
GCCGAAGAGG CCGAGAACCC GGGCGACAAG GAGCTGCTTG AAGTCTTCCT CGAAGAAAGC
TCAGACATTG TTGAAAGCGC CGCCGCCGCG CTTGCGCGTT GGCAGGCCGA CCCCCGCAAC
AGCGCCGAGG TGGACAACCT GCTGCGTGAT TTGCACACGC TCAAGGGCGG GGCGCGCATG
GTGGAAATTG CCGCTATCGG CGACCTGGCC CACGAACTGG AGTTCCTGTA CGAATTGCTG
GCTGCTGGAC GCTTGCCACC TAGTGCACCG TTGTTTGCTC TGCTGCAAAA CTGCCATGAC
CGTCTGGCGC ACATGCTTGA CGCCGTGCGT CTGGGGCAGC CGCTGCATGC GGCTACTGCG
TTGATCGACT ACATCCGCAA CTTTAGCAGC GCCGCCCTGA CCGACAGCGT TGCCGGGCAG
GCCCCGGCCG GGGCTGCACC TGCCGACGCA CCTGCCACTA CGCCGGAGCG CCCCCCCGGT
GACCTGGTCA AGGTGGACGC CGAACTGCTC GATGACCTGG GAAACCTGGC TGGTGAGCAC
TCGGTCATCC GTGGACGTAT CGAGCAACAG GTCAATGACG CCCAGTTCGC CTTGAGCGAG
ATGGAAACCA CGCTGGAGCG CATGCGCGAC CAGTTGCTGC GTCTGGATAT GGAAACCCAA
GGGCGAATCA GCAGCCGTCA GCCGTTCGAA GGTGACGCTT ACGAGGATTT CGACCCGCTG
GAAATGGACC GCCATTCCCA ACTGCAGCAA TTGTCACGGG CGTTGTTCGA ATCGGCCTCT
GACCTGCTTG ACCTGAAAGA GACGTTGGCC CAGCGCGCGC AGGAGGCGCA GGCCCTACTG
CAGCAGCAGG CGAGGGTGAA CAGCCAGTTG CAGGAAGGCC TCACCGCCAC GTTGATGGTG
CCGTTCGAGC GTCTCGTGCC GCGCCTGCAG AGGGTGGTGC GCCAAGTGGC CAGTGAATTG
GGCAAGCAGG TCGAACTGGT GGTCGGCAAC GCCGAAGGCG AGCTTGATCG CAGTGTTCTC
GAGCGTATGG TTGCGCCCCT GGAGCACATG CTGCGCAATG CTGTCGATCA TGGCCTTGAG
ACCCGTGAAG CGCGCTTGGC TGCCGGCAAG CCTGAGCTGG GTACCATCCA TCTCAATTTG
CTCCATGAGG GGGCCGATAT CGTCATCGAA ATGACCGACG ACGGTGCCGG CGTGCCGCTG
GATGCTGTGC GGCGCAAGGC GATCAAGCGT GGCCTGCTGG ACCCCCAGGC ACGCTTGAGT
GATCACGAGA TCCTGCAGTT CATCTTGCGC CCGGGGTTTT CCACCGCTGA GAAGATCACC
CAGATTTCCG GGCGTGGCCT GGGCATGGAC GTGGTGCACG AAGAGGTCAA GCAACTGGGC
GGCTCGATGA GTATCGAGTC GGCGCAAGGC AAGGGCGCAC GCTTTCTGAT TCGCCTGCCA
TTCACGGTGT CGATCAACCG TGCGGTGATG GTCCACCTGG GTGAGGAGCA GTACGCCATA
CCGCTCAACA CCATCGAAGG TATCGTGCGC GTGCCGCCGG CCGAGCTGGC TATCTGTTAT
CAGCGGGATG TGCCCCGCTA CGGCTATGCT GGCCATGAAT ACGATTTGCG TTACTTGGGC
GAGCTGCTGC AAGGCCTGCC ACGGCCAGGT CTTCTGGGCC AGAGCGTGCC ATTGCCGGTG
TTGCTGGTGC ATTCCCAGGA GCAGTCGTTC GCCATTCAGG TCGATAGCCT GTCGCCGAGC
CGCGAGATCG TGGTGAAGAG CCTGGGCCCC CAGTTCGCCG CCGTGCCTGG GTTGTCCGGC
GCGACTCTGC TCGGTGATGG TCGGGTGGTA CTGATTCTTG ATCTGCTTGG CCAGTTGCGC
GGCCAGCAGC GTCGGCTGGC GCGGCTGCCG GGTGGTAGCG GGGTGCAGCG TACGCTGTTC
GGCCCGGCGC CGCGGCGGGC GTCGCTGGTG ATGGTGGTGG ATGATTCGGT GACAGTGCGC
AAGGTGACCA GCCGCCTGCT GGAGCGCCAT GGGATGAGCG TGCTGACGGC CAAGGACGGT
GTCGATGCCA TGGCGTTGCT GGAAGAGCAC CGCCCGGATG TGTTGCTGCT GGACATCGAA
ATGCCGCGCA TGGATGGCTT TGAAGTGGCC ACCCGTATTC GTCGCGACGA GCGCCTTAAA
GGCCTGCCGA TCATCATGAT CACCTCGCGC ACCGGGCAGA AACACCGCGA CCGGGCCATG
GCCATCGGCG TCAACGACTA CCTGGGCAAG CCGTATCAGG AGTCGGTGCT GCTGCAGAGT
ATTGCCCATT GGAGCCAAAC CCATGCTTGA
 
Protein sequence
MATAVSPERH DTVALAWTKA AILDCLGRAR QALERFAGET DDLSMLAFVV DNLHQVHGCL 
RMLELRGATR LAEELELLAR ALAEGQVSPR GDCLGPLFRG LEQLPSYLER LRGARHDLPL
VMLPLLNQLR ACRGVEPLAQ GSLISGAAQR FAGSDDLANL DLSLGNWREQ VQAGPGRDAL
RSVISALCDD LMRIKERLDQ FVRGDRQHSE QLDSLLAPLR HVADTLAVLG FQQPRRVIID
QVLALQALAQ GQRVADDAVL MDVAGALLYV EASLNGMVGP LDEGGQGGLP GSDLAEIRQL
VLNESLNVLQ QAKDLIGDCL ESGWPRQRLQ PLPGLLQQVR GALAMLMLPA AAEVLAGCAG
YVHGWLQHLD VEPPPDELDH LADALSASEC YLQWRVADPL ADAQPFLDRA RVSLAALGVQ
CTLGESVIAQ DGSTDGVDDE LREVFLEEAG ELLPQIERHW LRWRADNSLR DALLEVRRDL
HTLKGSGRMV HAQAVAELAW GGEHLLNRVL EGRMALAPEG VVALQQVVVH LPDLLADFAA
GQMPQVTEIE QLASHLHALA ENDSPAGAEI DGLDPLLLDI FRNEAQGHLA SLEAFLQGAG
GHDTDVSDTL QRALHTLKGS AAMAGVLPIA ELATAFDRLV REYRGHHLPL QMAELEWLEA
ARALLHLSLA QLGSSPLAPI PGAAELIEQV GEAVDMRLAS LHDEPQHGRR GKRDPQLIAS
FLAQSMDILL DAEALLSRWQ EQPGQRQSLD SLLDELTTLC HGAHLADLRQ MDDVCEALLD
LYGAVEEGSL AADERFFAQA RQAHGVLLDM LDEIAAGQEP SARPDCIDGL RGLLDDALAP
DATGLVAPGS VTRLDGPLAL AEEAENPGDK ELLEVFLEES SDIVESAAAA LARWQADPRN
SAEVDNLLRD LHTLKGGARM VEIAAIGDLA HELEFLYELL AAGRLPPSAP LFALLQNCHD
RLAHMLDAVR LGQPLHAATA LIDYIRNFSS AALTDSVAGQ APAGAAPADA PATTPERPPG
DLVKVDAELL DDLGNLAGEH SVIRGRIEQQ VNDAQFALSE METTLERMRD QLLRLDMETQ
GRISSRQPFE GDAYEDFDPL EMDRHSQLQQ LSRALFESAS DLLDLKETLA QRAQEAQALL
QQQARVNSQL QEGLTATLMV PFERLVPRLQ RVVRQVASEL GKQVELVVGN AEGELDRSVL
ERMVAPLEHM LRNAVDHGLE TREARLAAGK PELGTIHLNL LHEGADIVIE MTDDGAGVPL
DAVRRKAIKR GLLDPQARLS DHEILQFILR PGFSTAEKIT QISGRGLGMD VVHEEVKQLG
GSMSIESAQG KGARFLIRLP FTVSINRAVM VHLGEEQYAI PLNTIEGIVR VPPAELAICY
QRDVPRYGYA GHEYDLRYLG ELLQGLPRPG LLGQSVPLPV LLVHSQEQSF AIQVDSLSPS
REIVVKSLGP QFAAVPGLSG ATLLGDGRVV LILDLLGQLR GQQRRLARLP GGSGVQRTLF
GPAPRRASLV MVVDDSVTVR KVTSRLLERH GMSVLTAKDG VDAMALLEEH RPDVLLLDIE
MPRMDGFEVA TRIRRDERLK GLPIIMITSR TGQKHRDRAM AIGVNDYLGK PYQESVLLQS
IAHWSQTHA