Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0458 |
Symbol | |
ID | 6109366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 501408 |
End bp | 502022 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620214 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001747332 |
Protein GI | 170719644 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCC GCGACCGTAT TCTCGAATGC GCCCTGCAGC TGTTCAACCA GCAGGGCGAG CCCAACGTTT CGACCCTTGA GATTGCCAAC GAGCTGGGCA TCAGCCCTGG CAACCTGTAT TACCACTTCC ACGGCAAGGA GCCTTTGATA ATCGGCCTGT TCGAGCGCTT CGAAGAAGCG CTTATGCCGC TGCTGGACCC GCCGCTGGAA GTGCGCCTGG ATGCCGAGGA CTACTGGCTG TTTCTGCACC TGATTGTCGA ACGCATGGCC CAGTACCGCT TCCTGTTCCA GGATCTGTCG AACCTGACCG GTCGCCTGCC CAAGCTGGCG CGGGGCATGC GCAGCCTGAT CAATGCGCTC AAGCGCACAC TGGCGGCATT GCTGGCCAGC CTCAAGGGCC AGGGCCAGGT AGTCAGTGAG ACGCAGGCAC TGGGGCAACT GGTGGAACAG ATCACCCTGA CGCTCATGTT TTCGCTGGAT TACCAGCGCG TACTGGGCCG CGAAGGGGAT GTAGGGATCG TGGTGTATCA GGTGATGATG CTGGTGGCGC CGCATCTGCA GGCGCCTGCG CGGGAGGCGG CGGAGCAGTT GGCGGTGCGG TATCTGGAGG GGTAG
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Protein sequence | MKTRDRILEC ALQLFNQQGE PNVSTLEIAN ELGISPGNLY YHFHGKEPLI IGLFERFEEA LMPLLDPPLE VRLDAEDYWL FLHLIVERMA QYRFLFQDLS NLTGRLPKLA RGMRSLINAL KRTLAALLAS LKGQGQVVSE TQALGQLVEQ ITLTLMFSLD YQRVLGREGD VGIVVYQVMM LVAPHLQAPA REAAEQLAVR YLEG
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