| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0454 |
|---|
| Symbol | ubiE |
|---|
| ID | 6109362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 498737 |
|---|
| End bp | 499507 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641620210 |
|---|
| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
|---|
| Protein accession | YP_001747328 |
|---|
| Protein GI | 170719640 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0799871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC AGCGCAAAGG CGAACACGCC GAACCCACCA CCCATTTCGG TTACCAGGAT
GTGCCCGAGA GCCAGAAGGC GAAGAAAGTC GCCGAAGTGT TTCACTCGGT GGCTGCCAAG
TACGACCTGA TGAACGATGT ACTTTCCGGC GGCATGCACC GCCTATGGAA GCGCTTCACC
ATCGAGCTGT CAGGTGTGCG TAGCGGCAAT CGGGTGCTGG ACATCGCCGG CGGCACGGGT
GATCTGGCAG CCAAGTTTTC GCGCCTGGTC GGCCCTACCG GCCAAGTGGT GCTCGCCGAC
ATCAACGACT CGATGCTCAA GGTCGGCCGC GACCGCCTGC TCGACCGCGG TGTTGCCGGC
AACATCGAGT TTGTCCAGGC CGATGCCGAG AAACTGCCAT TCCCGGACAA CCACTTCGAC
TGCGTTACCA TCGCCTTCGG CCTGCGCAAC GTCACCCACA AGGACGAAGC CATCCGCTCG
ATGCTGCGCG TGCTCAAGCC GGGCGGGCGT CTGTTGATCC TGGAGTTCTC CAAACCGACC
AACAAGCTGA TGTCCAAGGC CTACGACGCC TACTCGTTCG CCTTCATGCC GCTGGCTGGC
AAGCTGATCA CCAATGACTC CGAGAGCTAC CGTTACCTCG CCGAGTCGAT TCGCATGCAC
CCCGACCAGG AAACCCTAAA GGCCATGATG GTTGATGCCG GCTTCGACCG GGTCACCTAC
CACAACATGA CCAGCGGCAT TGTCGCCGTG CACCGGGGAA TCAAGCCCTG A
|
|---|
| Protein sequence | MNDQRKGEHA EPTTHFGYQD VPESQKAKKV AEVFHSVAAK YDLMNDVLSG GMHRLWKRFT
IELSGVRSGN RVLDIAGGTG DLAAKFSRLV GPTGQVVLAD INDSMLKVGR DRLLDRGVAG
NIEFVQADAE KLPFPDNHFD CVTIAFGLRN VTHKDEAIRS MLRVLKPGGR LLILEFSKPT
NKLMSKAYDA YSFAFMPLAG KLITNDSESY RYLAESIRMH PDQETLKAMM VDAGFDRVTY
HNMTSGIVAV HRGIKP
|
|---|
| |