Gene PputW619_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0447 
Symbol 
ID6109355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp494237 
End bp495028 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID641620203 
ProductSec-independent protein translocase, TatC subunit 
Protein accessionYP_001747321 
Protein GI170719633 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.497745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA AACCGCAAGA CGACCAGCCC ATGCCGCTGG TCTCGCACCT GACCGAACTG 
CGCACCCGCC TGCTGCGCTG CGTGGCCGCC ATCTTCCTTA TTTTTGCCGG GCTGTTCTCC
TTCGCCCAGC AGATCTACAC CTTGGTCTCG GCCCCACTGC GCGAGCACTT GCCGGCAAAC
GCCACGATGA TTGCCACCGA CGTGGCCTCG CCGTTCCTCA CGCCGTTCAA GCTGACCATG
ATCGTTTCGC TGTTCCTGGC GATCCCGTTC ATCCTGCAGC AGATCTGGGG TTTTATCGCG
CCTGGCCTGT ATCGCCACGA AAAGCGCATC GCCATTCCGT TGCTGGTGTC GAGCATCTTC
CTGTTCTATG CCGGCATGGC CTTCGCCTAC TTCCTGGTGT TCCCGCTGAT CTTCGGCTTC
TTCGCCAGCG CCACGCCGGA AGGTGTGTCG ATGATGACCG ACATTTCCAG TTATCTGGAC
TTCGTCATGA CATTGTTCTT CGCCTTCGGT GTTGCCTTCG AGATCCCGGT AGCGGTGGTG
CTGCTGGTGT GGATCGGCGT AGTCGACGTG CAATACCTGA AGAAAATCCG TCCCTACGTG
ATCATCGGCT GCTTCGTGGT CGGCATGATC CTGACCCCGC CCGACATCTT CTCGCAGACC
TTGCTCGCCG TGCCCATGTG GCTGCTGTTC GAGATCGGCG TGCTGTGTGG CAGCCTGATC
CGCAAGCGCA GCCACGCCGA AGATGACACG GCAAACGACC CCAACGACCA GCCACCAGCG
ACCCAGCCGT GA
 
Protein sequence
MSEKPQDDQP MPLVSHLTEL RTRLLRCVAA IFLIFAGLFS FAQQIYTLVS APLREHLPAN 
ATMIATDVAS PFLTPFKLTM IVSLFLAIPF ILQQIWGFIA PGLYRHEKRI AIPLLVSSIF
LFYAGMAFAY FLVFPLIFGF FASATPEGVS MMTDISSYLD FVMTLFFAFG VAFEIPVAVV
LLVWIGVVDV QYLKKIRPYV IIGCFVVGMI LTPPDIFSQT LLAVPMWLLF EIGVLCGSLI
RKRSHAEDDT ANDPNDQPPA TQP