| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0444 |
|---|
| Symbol | |
|---|
| ID | 6109352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 489390 |
|---|
| End bp | 491333 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641620200 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001747318 |
|---|
| Protein GI | 170719630 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.414929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCT ACCTCAACCG CAGGATTGGC AACATCAGCG TCGGCGCCAA GCTCGCTCTG
GGTTTTGCCG TGGTACTGCT GCTCACCGTG GCCACTGCCG CCAGCGGCTG GCGCGCCCTG
GACGATGCCA TTACGCGCTC GGAGCAGCTC AGCGAAATTG GCCGGATCAA TGATCTGGTC
AAGGACCTGC GCGCCGAGCG CATCACCTAC AGGGTGCTGG CCGATGATGC CAGCAAAGCG
CAGATCACCC GCATCCTGCA ACAACTCGAC GCCATGCTGA CCACGCTGCA GCAACGCAGC
AGTGTCGATG AGTCGCGCCA GATGCTGGGC CAGAAGCTGC AACTGCTGCA GCGCCTGCAC
GAAAATTTCG CCACCTTGCA GCGCACCGTT GAAAGCCGAC GTGGATTGCG CGAGGCCATG
CAGGCGCAGG AGCAAAAGCT CAACGGCGTC ATCGACGAAC TGGAAACCCA GGCCCTGCTG
AAGATGCCCG CCGACAGCCA GCAAAGCGGC CTGCTGGGCC TGATGGACAG CCTCACCCGG
CATGTGGACG GCGCCAACCA GCAAAGCCTG GTGCCGGCGT ACACCTTTGT GCCGCTGGAG
GACTTCGCCA AGGTTGGCCA GGCAGCGCTG GACGCTGCCG ACAAAAGCCT GGGGCAGCTG
ATCCAGGCCC TTGCCCCCTT GGGCCTTTCG CGTGCAGTGA TGGAGCAACC CGGCGTGGAA
CTGGGGAAAT ACCGCGCCAG CCTCGAGCAG TACCGACGCG CCGCCCTGAG TGTCGAGCAG
TTGCAGAACG ACATGGAGCA GATGGGCAAC GAACTGCGTG CTGTGAGCCT GGAGTTGAGT
AAAAGGAAGG TCGAGCAGCG CGACAGCGAA GCACTGGCCG CCCGCTCGCT GTTGACCAGC
GTTGCGGTGC TGGCCTTGCT GGTGGGCGTA GCGGCCGGCT GGCTGATCAC CTTGCAGATC
ACCCAGCCGC TACGCCAGAC CCTGGCGGTA GCAGCACGCA TCGCCCGGGG TGACCTGAGC
CAGGTGGAGC CTGTGGATCG TCGTGACGAA ATGGGCCAGT TGCAGGCCAG CATGCAGGAA
ATGACCCTGA GCCTGCGCGA GCTGATCGGC GGTATCGATC AAGGCGTCGG CCATCTGTCA
CAGGCCGCCA CGCAACTGGC AGCCAGCAGC GAGGACACCA AGCTGCGCAT CAGCCAGCAA
CGCGACGAAA CCGATCAGGT CGCCACTGCC ATGAACCAGA TGAGCGCCAC GGTCCAGGAA
GTAGCGCAGA ACGCCGAACA AGCTTCATTG GCGGCAACCA ACGCCGACCA GCAGGCCCAG
CAGGGCGATC AGGTGGTGAC CGAGGCCATA GGCCGTATCG AGCAACTGGC CAGGCAAATG
GACGATTGCC TGGCGGCAAT GCAGCATTTG GCGGGCGAAA GCCAGCGAAT CGGCAGCATT
CTCGATGTGA TCAAATCGGT CTCCGAGCAA ACCAACCTGT TGGCGTTAAA CGCCGCCATC
GAAGCCGCCA GAGCTGGTGA GGCCGGGCGT GGCTTTGCCG TGGTGGCTGA CGAAGTTCGC
GGCTTGGCCC AACGCACGCA GCAGTCCACG GAGGAGATCG AGCAATTGAT CGAAAGCTTG
CACAGCGGCA CCGACGAGGT GACCAGCCTG CTCGACAACA GCAAACGCCT GACCGAGCAA
AGTGTCGAGC TGAGCCGCAA GGCCGGGGAT GCCTTGAGCC AGATCACCGA TACGGTGTCG
AGCATCCAGG GCATGAACCA GCAGATTGCC ACGGCGAGCG AGGAACAGAG TGTGGTGGCC
GAACAGATAA ACCGCAGTGT AATCAGCGTG CGCGATGCGT CGGACCAGAC CAGTGCGGCC
AGTGAACAAA CGGCAGCTTC AAGCGGCGAG CTGGAGCACC TGGGGCAGCA GCTGCGAGGG
ATGGTCGGGC GTTTCAGCCT CTGA
|
|---|
| Protein sequence | MFGYLNRRIG NISVGAKLAL GFAVVLLLTV ATAASGWRAL DDAITRSEQL SEIGRINDLV
KDLRAERITY RVLADDASKA QITRILQQLD AMLTTLQQRS SVDESRQMLG QKLQLLQRLH
ENFATLQRTV ESRRGLREAM QAQEQKLNGV IDELETQALL KMPADSQQSG LLGLMDSLTR
HVDGANQQSL VPAYTFVPLE DFAKVGQAAL DAADKSLGQL IQALAPLGLS RAVMEQPGVE
LGKYRASLEQ YRRAALSVEQ LQNDMEQMGN ELRAVSLELS KRKVEQRDSE ALAARSLLTS
VAVLALLVGV AAGWLITLQI TQPLRQTLAV AARIARGDLS QVEPVDRRDE MGQLQASMQE
MTLSLRELIG GIDQGVGHLS QAATQLAASS EDTKLRISQQ RDETDQVATA MNQMSATVQE
VAQNAEQASL AATNADQQAQ QGDQVVTEAI GRIEQLARQM DDCLAAMQHL AGESQRIGSI
LDVIKSVSEQ TNLLALNAAI EAARAGEAGR GFAVVADEVR GLAQRTQQST EEIEQLIESL
HSGTDEVTSL LDNSKRLTEQ SVELSRKAGD ALSQITDTVS SIQGMNQQIA TASEEQSVVA
EQINRSVISV RDASDQTSAA SEQTAASSGE LEHLGQQLRG MVGRFSL
|
|---|
| |