Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0443 |
Symbol | |
ID | 6109351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 488538 |
End bp | 489272 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641620199 |
Product | ABC transporter related |
Protein accession | YP_001747317 |
Protein GI | 170719629 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.996427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGAAG TCCGTGACCT TTTGAAAGTG TTCGACACCC GAGGCCAGGT AGTGCGTGCG GTGGACAACG TCACCACCCA GGTAGCCAAG GGTGAAGTGG TCGTGGTGCT TGGCCCGTCG GGGTCCGGCA AGTCTACGTT CCTGCGCTGC CTCAACGGCC TGGAGCATTT CGACGAGGGC CATGTGGCCA TCAACGGGCT GCGGTTGGAA GACCCGAAAA CCGACATCAA TGCCTACCGC CGCGAAGTCG GCATGGTGTT CCAGCATTTC AACCTGTTCC CGCACATGAC GGTGCTGGAG AACCTGTGCC TGGCGCAAAA GGTCGTGCGC AAGCGTGGTA AGGCCGAGCG TGAGGCCAAG GCGCGGGCGT TGCTGGAAAA GGTAGGTATC TCGGAGAAGG CCAATGAGTA CCCGTCGCGG CTTTCCGGTG GTCAGCAACA ACGGGTGGCG ATTGCCCGTG CGCTGGCAAT GGAGCCTAAG GTGATGCTGT TCGACGAGCC GACCTCGGCG CTCGACCCGG AAATGGTCGG TGAAGTATTG GACGTGATGA AGACCTTGGC CCAGGAAGGC ATGACCATGG TCTGCGTGAC CCATGAAATG GGCTTTGCCC GCGAAGTGGC CGACCGCGTG CTGTTCTTCG ATCACGGCAA GTTGCTGGAA GATTCGGCGC CTGCGGCGTT CTTTGCCTCG CCGAAGGATC CACGGGCGCA AGCGTTCCTG CGCCAGGTGC TCTGA
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Protein sequence | MIEVRDLLKV FDTRGQVVRA VDNVTTQVAK GEVVVVLGPS GSGKSTFLRC LNGLEHFDEG HVAINGLRLE DPKTDINAYR REVGMVFQHF NLFPHMTVLE NLCLAQKVVR KRGKAEREAK ARALLEKVGI SEKANEYPSR LSGGQQQRVA IARALAMEPK VMLFDEPTSA LDPEMVGEVL DVMKTLAQEG MTMVCVTHEM GFAREVADRV LFFDHGKLLE DSAPAAFFAS PKDPRAQAFL RQVL
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