Gene PputW619_0420 details

Gene Information

• Locus tag: PputW619_0420
• ID: 6109328
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida W619
• Kingdom: Bacteria
• Replicon accession: NC_010501
• Strand: +
• Start bp: 455074
• End bp: 456894
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641620176
• Product: GTP-binding protein TypA
• Protein accession: YP_001747294
• Protein GI: 170719606
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 0.710155
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATCGAAA ATCTGCGTAA CATCGCCATC ATCGCCCACG TTGACCATGG TAAAACCACC 
CTGGTCGACA AACTCCTGCG TCAGTCCGGC ACCCTGGAGC GTAACGAGCT CAACGACGAG 
CGCGTAATGG ACTCCAACGA CCAGGAAAAA GAGCGTGGCA TTACCATTCT GGCGAAAAAC 
ACCGCCATCA ACTGGAACGG CTACCACATC AACATCGTCG ACACCCCCGG CCACGCCGAC 
TTCGGTGGCG AGGTTGAGCG TGTAATGTCC ATGGTCGACT CCGTGCTGCT GCTGGTCGAC 
GCCCAGGACG GCCCTATGCC GCAAACCCGC TTCGTGACCA AGAAGGCCTT CGAAGCCGGC 
CTGAAGCCGA TCGTCGTGAT CAACAAGGTC GACCGTCCGG GCGCGCGTCC TGACTGGGTT 
CTGGACCAGA TCTTCGACCT GTTCGACAAC CTCGGTGCTA CCGACGAGCA GCTGGACTTC 
AAAGTGGTCT ACGCCTCGGC CCTGAACGGC ATCGCCGGTC TGGACCACAC CGCCATGGCC 
GAAGACATGA CCCCGCTGTA CCAGTCGATC GTCGACAACG TACCTGCGCC GGACGTTGAC 
CGTGAAGGCC CGTTCCAGAT GCAGATCTCG GCACTGGACT ACAACAGCTT CCTGGGTGTT 
ATCGGCGTTG GCCGTATCGC CCGCGGCCGC GTCAAGCCGA ACACCCCGGT TGTCGCCATC 
GACACCAACG GCAAGAAGCG TAACGGCCGT ATCCTCAAGC TGATGGGCCA CCACGGCCTG 
CACCGTGTGG ACGTCGAAGA AGCCCAGGCT GGCGATATCG TCTGCATCAG CGGCTTCGAC 
GAGCTGTTCA TCTCCGACAC CCTGTGCGAC CCGACTGCCG TCGAAGCGAT GAAGCCGCTG 
ACCGTTGACG AGCCAACCGT TTCGATGACC TTCCAGGTCA ACGACTCGCC GTTCTGCGGC 
AAGGAAGGCA AGTTCGTCAC CAGCCGTAAC ATCAAGGACC GTCTGGACAA GGAGCTGCTG 
TACAACGTTG CTCTGCGCGT TCAGGAAACC GATTCCCCTG ACAAGTTCAA GGTATCGGGC 
CGTGGTGAGC TGCACCTGTC GGTACTGATT GAAACCATGC GCCGCGAAGG CTTCGAGATG 
GCCGTAGGCC GCCCTGAAGT GATCATCCGC GAAGTCGGTG GCGTCAAGCA GGAACCGTTC 
GAGAACGTCA CCATCGACAT CCCTGAAGAA TCCCAGGGCA AGGTCATGGA AGAAATGGGC 
CTGCGTAAAG GCGACCTGAC CAACATGGTT CCGGATGGCA AGGGCCGTGT TCGCCTGGAG 
TACAACATTC CAGCCCGTGG TCTGATCGGC TTCCGTAACC AGTTCCTGAC CCTGACCAAC 
GGTGCAGGCA TCCTGACCTC GATCTTCGAT CGCTATGACA CCATGAAGTC GGGCCAGATG 
TCCGGCCGCC TCAACGGTGT ACTGGTTTCG GTCGAGACCG GCAAGGCACT GACCTACTCC 
CTGGAAACCC TGCAGGCGCG CGGCAAGCTG TTCGTCGAGC ACGGTCAGGA GATCTACAAC 
GGTCAGATCA TCGGCCTGAA CAGCCGTGAC AACGACCTGG GCGTGAACCC GACCAAGGGC 
AAGAAGCTCG ACAACATGCG TGCTTCGGGC AAAGACGAAG TCATCGCCCT GGTTCCGCCG 
GTTCGTCACA CCCTCGAACA GGCCCTGGAA TTCATCCAGG ACGACGAGCT GTGCGAAGTC 
ACGCCGAAGT CGATCCGTCT GCGCAAGAAG ATCCTGGACG AAGGCGAGCG TACCCGCGCT 
GCCAAGAAAG CCAAGAACTG A 

 

Protein sequence

MIENLRNIAI IAHVDHGKTT LVDKLLRQSG TLERNELNDE RVMDSNDQEK ERGITILAKN 
TAINWNGYHI NIVDTPGHAD FGGEVERVMS MVDSVLLLVD AQDGPMPQTR FVTKKAFEAG 
LKPIVVINKV DRPGARPDWV LDQIFDLFDN LGATDEQLDF KVVYASALNG IAGLDHTAMA 
EDMTPLYQSI VDNVPAPDVD REGPFQMQIS ALDYNSFLGV IGVGRIARGR VKPNTPVVAI 
DTNGKKRNGR ILKLMGHHGL HRVDVEEAQA GDIVCISGFD ELFISDTLCD PTAVEAMKPL 
TVDEPTVSMT FQVNDSPFCG KEGKFVTSRN IKDRLDKELL YNVALRVQET DSPDKFKVSG 
RGELHLSVLI ETMRREGFEM AVGRPEVIIR EVGGVKQEPF ENVTIDIPEE SQGKVMEEMG 
LRKGDLTNMV PDGKGRVRLE YNIPARGLIG FRNQFLTLTN GAGILTSIFD RYDTMKSGQM 
SGRLNGVLVS VETGKALTYS LETLQARGKL FVEHGQEIYN GQIIGLNSRD NDLGVNPTKG 
KKLDNMRASG KDEVIALVPP VRHTLEQALE FIQDDELCEV TPKSIRLRKK ILDEGERTRA 
AKKAKN