| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0418 |
|---|
| Symbol | |
|---|
| ID | 6109326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 451615 |
|---|
| End bp | 453021 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641620174 |
|---|
| Product | glutamine synthetase, type I |
|---|
| Protein accession | YP_001747292 |
|---|
| Protein GI | 170719604 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.910839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.393257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGT CGGTTCAACT CATCAAAGAT CATGACGTCA AGTGGATTGA TCTGCGTTTC
ACGGACACCA AAGGCACTCA GCATCACGTG ACCATGCCAG CGCGTGATGG CCTGGACGAA
GACTTCTTCG AAGTCGGCAA GATGTTCGAC GGCTCCTCCA TCGCTGGCTG GAAAGGCATC
GAAGCCTCCG ACATGATCCT GATGCCGGTC GACGATACCG CCGTACTGGA CCCGTTCACC
GAAGAGCCGA CCCTGATCAT CACCTGCGAC ATCGTCGACC CGTCGAGCAT GCAGGGCTAC
GATCGCGACC CACGTGCGAT CGCCAAGCGC GCTGAAGAAT ACCTCAAGAG CACCGGCATC
GGTGACACCG TCTTCGCCGG CCCAGAGCCT GAGTTCTTCA TCTTCGACGA AGTGAAGTTC
CAGTCGGACA TCTCCGGCTC GATGTTCAAG ATCTTCTCCG AGCAAGGCTC GTGGATGACT
GGCGCTGACG TGGAAGGCGG CAACAAAGGT CACCGTCCTG GCGTCAAAGG CGGCTACTTC
CCGGTTCCGC CGTTCGACCA CGACCACGAA ATCCGTACTG CCATGTGCAA CGCGCTGGAA
GAGATGGGCC AGACCGTCGA AGTTCACCAC CATGAAGTGG CGACTGCCGG CCAGAACGAA
ATCGGCGTCA AGTTCAACAC CCTGGTGAAG AAAGCTGACG AAGTACAGGC CCTGAAATAT
GTCGTGCACA ATGTTGCCGA CGCATACGGC CGTACCGCCA CCTTCATGCC AAAACCACTG
TACGGCGACA ACGGCTCGGG CATGCACGTG CACATGTCGA TCTGGAAAGA CGGCAAGAAC
ACCTTCGCGG GTGAAGGCTA TGCCGGTCTG TCCGAAACTG CCCTGTACTT CATCGGCGGT
ATCATCAAGC ACGGTAAGGC CCTGAACGGC TTCACCAACC CGTCGACCAA CTCCTACAAG
CGTCTGGTTC CAGGCTTCGA AGCCCCGGTT ATGCTGGCAT ACTCGGCACG CAACCGTTCC
GCCTCGATCC GCATTCCTTA CGTCGGCAGC CCTAAAGCCC GTCGTATCGA AGCGCGCTTC
CCGGACCCAT CGGCCAACCC GTACCTGGCT TTCGCAGCCC TGCTGATGGC TGGCCTGGAC
GGCATCCAGA ACAAGATTCA CCCAGGCGAT GCTGCCGACA AGAACCTGTA CGACCTGCCG
CCTGAAGAGG CGAAAGATAT TCCGCAAGTT TGCGGCAGCC TGAAAGAAGC TCTGGAAGAG
CTGGACAAAG GCCGTGCGTT CCTGACCAAA GGCGGCGTGT TCTCCGACGA CTTCATCGAT
GCCTTCATCG AACTGAAGAG CGAAGAAGAG ATCAAGGTCC GTACCTTCGT GCACCCGCTG
GAATACGAGC TGTACTACAG CTGCTGA
|
|---|
| Protein sequence | MSKSVQLIKD HDVKWIDLRF TDTKGTQHHV TMPARDGLDE DFFEVGKMFD GSSIAGWKGI
EASDMILMPV DDTAVLDPFT EEPTLIITCD IVDPSSMQGY DRDPRAIAKR AEEYLKSTGI
GDTVFAGPEP EFFIFDEVKF QSDISGSMFK IFSEQGSWMT GADVEGGNKG HRPGVKGGYF
PVPPFDHDHE IRTAMCNALE EMGQTVEVHH HEVATAGQNE IGVKFNTLVK KADEVQALKY
VVHNVADAYG RTATFMPKPL YGDNGSGMHV HMSIWKDGKN TFAGEGYAGL SETALYFIGG
IIKHGKALNG FTNPSTNSYK RLVPGFEAPV MLAYSARNRS ASIRIPYVGS PKARRIEARF
PDPSANPYLA FAALLMAGLD GIQNKIHPGD AADKNLYDLP PEEAKDIPQV CGSLKEALEE
LDKGRAFLTK GGVFSDDFID AFIELKSEEE IKVRTFVHPL EYELYYSC
|
|---|
| |