Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0408 |
Symbol | |
ID | 6109316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 442842 |
End bp | 444128 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620165 |
Product | peptidase M23B |
Protein accession | YP_001747283 |
Protein GI | 170719595 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.37343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGCG CCCTGATCCT CCTAGCCCTG TCTTGCCTGC TCAGCCCGGC CTTCGCCGAC GAGCGCGCAC AGACCCAGCA ACAACTGGAC GCCACCCGCC AGGACATCGC CGAGCTCAAG AAGACGCTGG GCAAGCTCCA GGAAGAAAAA TCCGGCGTGC AGAAAGACCT AAAAGCCACC GAGACCGACA TCGGCAACCT CGAAAAGCAG GTGGAGGCTC TGCAGCAAGA ACTAAAAAAG ACCGAGGGCG AGCTGGAGCG CCTTGATACC GAGAAAAAAA AACTCCAGAG CTCGCGCATT GAACAACAGC GACTGATCGC CATTCAGGCG CGGTCCGCCT ACCAGAACAA TGGCCGTGAG GAATACCTCA AGCTGCTGCT CAACCAGCAG AACCCAGAGA AGTTCGCCCG CACCCTCAGC TACTACGACT ACCTGAGCAA GGCGCGCATG GAGCAACTGC GTGCCTTCAA CGAGACCTTG CGCCAGCTGG CCAATGTCGA GCAGGACATT TCCCGCCAGC AAGAACAATT GCTGGCCCAG CGCGCCGACC TCGACAGCCG TCGCCAGGCT CTGGAAGCCG AGCGTGGAAA ACGTCAGCAG GTGCTGGCCA AGCTCAACAG TGACATGAAA GACCGCGACA AGAAGCTGCA GGCCCGTGAA CAAGACCAGG CGGACCTTGC CAAGGTGCTC AAGACCATCG AGGAAACCCT TGCCCGTCAG GCCCGTGAGG CCGAGGAAGC GCGCAAGAAG GCCCTGCTGG CCGAGCAGGA GGCCCAAAAG CGCCGACAGC AGCAAGCGCT GGCCGCACAG CAAGACAGCG AACCGCCAAA AAAGGCGCGC ACCACCCTTG GCCCGTTGGT TTCCAGCGAC AGCTCAACCT ACGGCGGTGC TTTTTCTGCT GCACGGGGCA AACTTCCCTG GCCCGTCAAT GGTCGATTGC TGGCACGTTT CGGTGAAGCC CGTGGCAGCG ATGCCCGAGC CAAGTGGGAC GGCGTGATGA TCAGCGCCAA CCCCGGCACC CAGGTGCGCG CCGTGCACGG CGGGCGCGTG GTATTCGCCG ACTGGTTGCG CGGTGCTGGA CTTCTGGTCA TTCTCGACCA TGGTAATGGT TACCTGAGCC TGTACGGCCA CAACCAGAGC CTGCTCAAGA GCGCCGGGGA CATCGTCAAG GCCGGCGAAG CCATTTCCAC AGTTGGCGAC AGCGGCGGCC AGGATGCCGC CGGCTTGTAC TTCGCCATCC GCCAGCAGGG CCGGCCCACC GACCCTTCGC AGTGGTGCAG AGGTTAA
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Protein sequence | MLRALILLAL SCLLSPAFAD ERAQTQQQLD ATRQDIAELK KTLGKLQEEK SGVQKDLKAT ETDIGNLEKQ VEALQQELKK TEGELERLDT EKKKLQSSRI EQQRLIAIQA RSAYQNNGRE EYLKLLLNQQ NPEKFARTLS YYDYLSKARM EQLRAFNETL RQLANVEQDI SRQQEQLLAQ RADLDSRRQA LEAERGKRQQ VLAKLNSDMK DRDKKLQARE QDQADLAKVL KTIEETLARQ AREAEEARKK ALLAEQEAQK RRQQQALAAQ QDSEPPKKAR TTLGPLVSSD SSTYGGAFSA ARGKLPWPVN GRLLARFGEA RGSDARAKWD GVMISANPGT QVRAVHGGRV VFADWLRGAG LLVILDHGNG YLSLYGHNQS LLKSAGDIVK AGEAISTVGD SGGQDAAGLY FAIRQQGRPT DPSQWCRG
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