| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0392 |
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| Symbol | hemE |
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| ID | 6109300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 417092 |
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| End bp | 418156 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620149 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001747267 |
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| Protein GI | 170719579 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCC TGAAGAACGA TCGTTTCCTG CGTGCACTGC TCAAGCAACC CGTAGACGTC
ACCCCTGTAT GGATGATGCG CCAGGCCGGC CGCTACCTGC CGGAATACCG CGCCAGCCGC
GCCAAGGCCG GTGACTTCAT GAGCCTGTGC ATGAACCCGC AGTTCGCCTG TGAGGTCACC
CTGCAGCCGC TGGAGCGCTA CCCGCTTGAC GCAGCGATCC TGTTCTCGGA CATCCTCACC
ATTCCTGATG CCATGGGCCT GGGCCTGTAC TTCGAGACAG GCGAAGGTCC GCGTTTCAAG
AAGGTCATCA GCACCCCGGC CGACATCGAA GCCCTGCTAA TCCCTGATCC GCAAAAAGAC
CTCGGCTACG TGATGGATGC CGTCAGTACC ATTCGGCGCG AGCTGAACGG CCGTGTGCCG
CTGATCGGTT TCTCCGGCAG CCCGTGGACC TTGGCCACCT ACATGGTCGA AGGCGGTTCG
TCCAAAGACT TCCGCAAGAC CAAGGCGATG GCCTACGACA ACCCGCAAGC CCTGCACTTG
TTGCTGGACA AGCTGGCACA GTCGGTCACC AGCTACCTCA ACGGGCAGAT CCTGGCTGGC
GCCCAGGCCG TGCAGATCTT CGATACCTGG GGCGGCAACC TGTCGGCGGC GGCGTATCAG
GAGTTCTCCC TGGCCTACAT GCGCAAGATC GTCAGCGGCC TGATCCGTGA GCACGATGGG
CGCAAGGTGC CGGTAATCCT GTTCACCAAG AACGGCGGCC TGTGGCTGGA GAGCATCGCC
GAAGCCGGCG CTGATGCCCT GGGCCTGGAC TGGACCTGCG AGATCGGCGA CGCCCGCCGC
CGCGTTGGCG ACAAGGTTGC CCTGCAAGGC AACATGGACC CGACCGTGCT GTACGCCAAG
CCCGAGGCCA TTCGCAACGA AGTGGCACGT ATCCTGGCGA GCTATGGCAA AGGTACCGGC
CATGTGTTCA ACCTCGGTCA CGGCATTACG CCGGAGGTCG ACCCGGAGCA TGCGGGTGTG
TTCATCAACG CCGTGCATGA GCTGTCGGCG CAGTATCACC AGTGA
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| Protein sequence | MTALKNDRFL RALLKQPVDV TPVWMMRQAG RYLPEYRASR AKAGDFMSLC MNPQFACEVT
LQPLERYPLD AAILFSDILT IPDAMGLGLY FETGEGPRFK KVISTPADIE ALLIPDPQKD
LGYVMDAVST IRRELNGRVP LIGFSGSPWT LATYMVEGGS SKDFRKTKAM AYDNPQALHL
LLDKLAQSVT SYLNGQILAG AQAVQIFDTW GGNLSAAAYQ EFSLAYMRKI VSGLIREHDG
RKVPVILFTK NGGLWLESIA EAGADALGLD WTCEIGDARR RVGDKVALQG NMDPTVLYAK
PEAIRNEVAR ILASYGKGTG HVFNLGHGIT PEVDPEHAGV FINAVHELSA QYHQ
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