Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0390 |
Symbol | gltB |
ID | 6109170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 410953 |
End bp | 415398 |
Gene Length | 4446 bp |
Protein Length | 1481 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620147 |
Product | glutamate synthase subunit alpha |
Protein accession | YP_001747265 |
Protein GI | 170719577 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAG GTCTGTACCA TCCCGAAGAA TTCAAGGACA ACTGTGGTTT TGGCCTGATC GCCCATATGA CGGGCGAACC CAGCCACCAC CTTCTGCAAA CTGCCATGCA GGCCCTGACT TGCATGACCC ACCGCGGCGG CATCAACGCC GACGGCAAGA CCGGTGACGG TTGCGGTCTG CTCATGCAGA AACCCGATCA ATTCCTGCGC GCCGTGGCCC AGGAACACTT TGCCGTCGAG CTGCCCAAGC AGTACGCCGT TGGCATGGTG TTCTTCAATC AGGACCCGGT AAAAGCAGAA GCCGCTCGCG CCAACATGGA CCGCGAAATC ATCGCTGCCG GCCTGACCCT GATTGGCTGG CGCAAAGTTC CGATCGACAC CAGCGTGCTC GGCCGCCTGG CGCTGGAGCG CCTGCCGCAG ATCGAACAGG TGTTCATCGG CGGTGAAGGC CTGAGCGATC AGGAATTCGC CATCAAGCTG TTCAGTGCCC GTCGCCGTTC GTCCGTGGCC AACGCCCACG ACGCCGACCA CTACATCTGC AGCTTCTCGC ACAAGACCAT CATCTACAAA GGCCTGATGA TGCCGCGCGA TCTCGCGGCC TTCTATCCAG ACCTGGACGA CGAGCGCCTG CAAACCGCAA TCTGCGTGTT CCACCAGCGC TTCTCTACCA ACACCCTGCC GAAATGGCCG CTGGCGCAGC CGTTCCGCTT CCTCGCCCAC AATGGCGAGA TCAACACCAT CACCGGTAAC CGCAACTGGG CCATGGCCCG TCGCACCAAG TTCGCCAACG ACCAGATCCC CGACCTCGAA GAGCTCGGCC CGCTGGTCAA CCGCGTAGGG TCCGACTCCT CGAGCATGGA CAACATGCTG GAGCTGATGG TCACCGGCGG TATCGACCTG TTCCGCGGCG TGCGCATGCT GGTACCGCCA GCCTGGCAGA ACGTCGAGAC CATGGACGCC GACCTGCGCG CGTTCTATGA ATACAATTCC ATGCACATGG AGCCGTGGGA TGGTCCGGCC GGCATCGTCA TGACCGAAGG CCGCCATGCG GTCTGCCTGC TTGACCGCAA CGGCCTGCGC CCGGCGCGCT GGGTGACCAC CAAGAATGGC TATATCACCC TGGCGTCGGA AATTGGCGTG TGGGACTACA AGCCTGAGGA TGTAATCGCC AAGGGCCGTG TCGGCCCAGG CCAGATCTTC GCCGTGGATA CCGAGACCGG CCACATCCTC GACACCGATG CCATCGACAA CCGCCTGAAG TCGCGCCACC CGTACAAGCG CTGGCTCCGT CAGCACGCCT TGCGCATCCA GGCGACGCTC ACCGACGACC AGGGCGCGGC CAGCTACGAC GCTGACCAGC TCAAGCAGTA CATGAAGATG TTCCAGGTCA CTTTCGAGGA GCGTGACCAG GTTCTGCGCC CACTCGGTGA GCAAGGCCAG GAAGCGGTCG GTTCGATGGG TGACGACACG CCAATGGCCG TGCTGTCGCA GCGCGTGCGT TCGCCTTACG ACTTCTTCCG CCAGCAGTTC GCCCAGGTCA CCAACCCGCC GATCGACCCG CTGCGCGAAG CGATCGTCAT GTCGCTGGAA ATCTGCCTGG GTGCCGAGCG CAACATCTTC CAGGAATCTC CAGAGCACGC CTCGCGGGTA ATCCTCAGCT CCCCGGTCAT CTCGCCCGCC AAGTGGCGTT CGCTGATGAA TCTGGAACGC GAAGGCTTCG ACCGCCAGCT GATCGACCTC AACTACGAGG AAGGCATTGG CCTGGAAGCG GCCATCCGTA ACATCGCCGA CCAGGCTGAA GAAGCGGTCC GCGCGGGCAA GACCCAGCTG GTACTCAGCG ACCGTTACAT CGCACCGGGC AAGCTGCCGG TGCATGCTTC GTTCGCCGTT GGCGCGGTCC ACCACCGCCT GACAGAAAAG GGCCTGCGTT GCGACAGCAA CATTCTGGTC GAAACCGCCA CCGCCCGTGA CCCGCACCAC TTCGCCGTGC TGCTGGGCTT CGGCGCCTCT GCGGTATACC CGTATCTGGC GTATGAAGTG CTGGCCGACC TGATCCGCAC CGGCGAAGTG CTGGGCGACC TGGACGAAGT CTTCAAGTAC TACCGCAAAG GCATCTCCAA GGGCCTGCTG AAGATCCTGT CGAAGATGGG CATCTCCACC ATCGCCTCCT ACCGTGGCGC CCAGCTGTTC GAAGCTGTGG GCCTGGCCGA AGAAGTCGTC GGCCTGAGCT TCAAAGGCGT CTCCAGCCGT ATCAAGGGTG CGCGTTTCGT CGACCTCGAG GGCGACCAGA AGCTGCTCGC CGCTGAGGCC TGGAGCGCAC GCAAGCCGAT CCAGCAGGGT GGCCTGCTCA AGTTCGTCCA CGGTGGTGAG TACCACGCCT ACAACCCGGA TGTGGTCAAT ACTCTGCAGG CCGCCGTGCA GCAGGGCGAC TACGCCAAGT TCAAGGAGTA CACCACGCTG GTCGACCAGC GCCCGGTGTC GATGATCCGC GACCTGCTGA AAGTGAAGGT GGCCGACGAG GCCCTGCCGC TGGATCAGAT CGAGCCGCTG GAGGCGATCC TCAAGCGCTT CGACTCCGCC GGTATCTCGC TGGGTGCGCT GTCGCCAGAG GCTCACGAAG CGCTGGCCGA GGCCATGAAC CGCCTGGGCG CGCGCTCCAA CTCCGGTGAG GGCGGTGAAG ACCCGTCGCG TTACGGCACC ATCCGCAGCT CCAAGATCAA GCAGGTGGCC ACCGGCCGCT TCGGCGTGAC CCCGGAATAC CTGGTCAATG CCGAGGTTCT GCAGATCAAG GTTGCCCAGG GCGCCAAACC GGGCGAGGGC GGCCAGTTGC CAGGCGGCAA GGTCAACGGC CTGATCGCCA AGCTGCGCTA TGCGGTACCG GGCGTGACCC TGATCTCGCC GCCACCGCAC CACGATATCT ACTCGATCGA AGACCTGGCC CAGCTGATCT ATGACCTCAA GCAGGTCAAC CCTCAAGCCC TGGTATCGGT CAAGCTGGTG GCAGAGGCAG GCGTTGGCAC CATCGCCGCT GGCGTGGCCA AGGCCTATGC CGACCTGATC ACCATCTCAG GTTATGACGG TGGTACCGGT GCTTCGCCGC TGACCTCTAT CAAGTACGCC GGCGCTCCGT GGGAACTGGG CCTGGCCGAA ACCCACCAGA CCCTGCGCGG CAACGACCTG CGCGGCAAGG TACGGGTACA GACCGACGGC GGCCTGAAGA CCGGTCTGGA TGTAATCAAG GCCGCTATCC TCGGTGCCGA AAGCTTTGGC TTCGGTACCG CACCGATGAT CGCCCTGGGC TGCAAATACC TGCGCATCTG CCACCTGAAC AACTGCGCCA CTGGCGTGGC CACGCAGAAC GACAAGCTGC GCAAGGACCA CTACATCGGC ACCGTCGACA TGGTGATCAA CTTCTTCACC TTCGTCGCCG AGGAAACCCG CGAGTGGCTG GCCAAGCTGG GTGTTCGCAG CCTGGGCGAG CTGATCGGCC GGACCGACCT GCTCGACGTG CTGCCAGGCG ATACCGAACG CCAGCACTAC CTGGACCTGT CGCCGCTGCT GGGCAGCTCG CACATCCCGG CCGACAAGCC GCAGTTCTGC GAAGTCGACA AGAACCCGCC GTTCGACAAG GGCGAGCTGG CCGAGAAGAT GGTCGAAATG GCCCTGCCGG CCATCCGCGA TCAGGCCGGT GGCGAGTTCG CGCTCGACAT CTGCAACTGT GACCGCTCCA TTGGTGCGCG CATCTCCGGC GAAATCGCCA AGCTGCACGG CAACCAGGGC ATGGCCGCAG CGCCGATCAC CTTCCGCTTC AAGGGTACCG CGGGCCAGAG CTTCGGCGTG TGGAACGCCG GTGGTCTGAA CCTGTACCTG GAAGGTGACG CCAACGACTA CGTCGGCAAA GGCATGACCG GTGGCAAGGT CACCATCGTG CCGCCAGCGG GCAGCCCGTT CGAAACCCAG CACAGCGCTA TCGTCGGCAA CACCTGCCTG TACGGCGCCA CGGGCGGCAA GCTGTTCGCC GCCGGCACCG CAGGCGAGCG CTTTGCTGTG CGTAACTCCG GCGCCCACGC TGTTGTCGAG GGTACTGGCG ATCACTGCTG TGAATACATG ACCGGTGGCT TTGTCTGCGT TCTGGGCAAG ACCGGTTACA ACTTCGGCTC TGGCATGACT GGCGGCTTCG CCTACGTGCT CGACATGGAC AACAGCTTCG TCGACAAACT TAACCACGAA CTGGTGGAAA TCCAGCGTAT CAGTGGTGAA GCGATGGAAG CCTACCGTAG CCACCTGGCG CGGGTCCTTG GCGAATACGT GGAAGAAACC GGCAGCGAGT GGGGGCGTGA GCTCTCGGAG AACCTGGACG ATTACGTGCG GCGCTTCTGG CTGGTCAAGC CGAAGGCGGC CAACCTCAAG CAACTGCTGT CCAGCACCCG TGCCAATCCG CAGTAA
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Protein sequence | MKTGLYHPEE FKDNCGFGLI AHMTGEPSHH LLQTAMQALT CMTHRGGINA DGKTGDGCGL LMQKPDQFLR AVAQEHFAVE LPKQYAVGMV FFNQDPVKAE AARANMDREI IAAGLTLIGW RKVPIDTSVL GRLALERLPQ IEQVFIGGEG LSDQEFAIKL FSARRRSSVA NAHDADHYIC SFSHKTIIYK GLMMPRDLAA FYPDLDDERL QTAICVFHQR FSTNTLPKWP LAQPFRFLAH NGEINTITGN RNWAMARRTK FANDQIPDLE ELGPLVNRVG SDSSSMDNML ELMVTGGIDL FRGVRMLVPP AWQNVETMDA DLRAFYEYNS MHMEPWDGPA GIVMTEGRHA VCLLDRNGLR PARWVTTKNG YITLASEIGV WDYKPEDVIA KGRVGPGQIF AVDTETGHIL DTDAIDNRLK SRHPYKRWLR QHALRIQATL TDDQGAASYD ADQLKQYMKM FQVTFEERDQ VLRPLGEQGQ EAVGSMGDDT PMAVLSQRVR SPYDFFRQQF AQVTNPPIDP LREAIVMSLE ICLGAERNIF QESPEHASRV ILSSPVISPA KWRSLMNLER EGFDRQLIDL NYEEGIGLEA AIRNIADQAE EAVRAGKTQL VLSDRYIAPG KLPVHASFAV GAVHHRLTEK GLRCDSNILV ETATARDPHH FAVLLGFGAS AVYPYLAYEV LADLIRTGEV LGDLDEVFKY YRKGISKGLL KILSKMGIST IASYRGAQLF EAVGLAEEVV GLSFKGVSSR IKGARFVDLE GDQKLLAAEA WSARKPIQQG GLLKFVHGGE YHAYNPDVVN TLQAAVQQGD YAKFKEYTTL VDQRPVSMIR DLLKVKVADE ALPLDQIEPL EAILKRFDSA GISLGALSPE AHEALAEAMN RLGARSNSGE GGEDPSRYGT IRSSKIKQVA TGRFGVTPEY LVNAEVLQIK VAQGAKPGEG GQLPGGKVNG LIAKLRYAVP GVTLISPPPH HDIYSIEDLA QLIYDLKQVN PQALVSVKLV AEAGVGTIAA GVAKAYADLI TISGYDGGTG ASPLTSIKYA GAPWELGLAE THQTLRGNDL RGKVRVQTDG GLKTGLDVIK AAILGAESFG FGTAPMIALG CKYLRICHLN NCATGVATQN DKLRKDHYIG TVDMVINFFT FVAEETREWL AKLGVRSLGE LIGRTDLLDV LPGDTERQHY LDLSPLLGSS HIPADKPQFC EVDKNPPFDK GELAEKMVEM ALPAIRDQAG GEFALDICNC DRSIGARISG EIAKLHGNQG MAAAPITFRF KGTAGQSFGV WNAGGLNLYL EGDANDYVGK GMTGGKVTIV PPAGSPFETQ HSAIVGNTCL YGATGGKLFA AGTAGERFAV RNSGAHAVVE GTGDHCCEYM TGGFVCVLGK TGYNFGSGMT GGFAYVLDMD NSFVDKLNHE LVEIQRISGE AMEAYRSHLA RVLGEYVEET GSEWGRELSE NLDDYVRRFW LVKPKAANLK QLLSSTRANP Q
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