| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0386 |
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| Symbol | |
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| ID | 6109166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 406000 |
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| End bp | 407268 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641620143 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_001747261 |
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| Protein GI | 170719573 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.591623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGGT TGATGAAGTG GCTGGTGGCG GCATTGCTGC CGATGCCGTT GCTGGCGGCA
ACGCCTTATC GGGGTGAACC GATTTCGCTG AACTTCCAGG ACGTAGAAGT GCGCCTTGTG
TTGCAGGTGC TTGCCGATTA TGCCGGGATC AATCTGGTCG CAAGCGACAC GGTGCAGGGC
AGTATTACCT TGCGTCTGCA GGATGTTCCT TGGGATCAGG CTCTGGAACT GGTGTTGCGC
AGCAAAGGGC TGGGCCGGCG GGAGGAGGGC AATGTGCTGT TGGTGGCGCC AGCGGTTGAG
CTGGCCGAAC AGGCTCTGGG AGCGCGCATG GGGTTGGAGC TGGAGGCCCA ATCGCGGCCG
TTGCGCCGCG AGTTGCTGCC GATACACCAC GCCGAGGCCT CGGAACTTGC CGAGTTGCTG
CTGGCTACGT TGGCCGATGA CGGCATTCTG ACTGGCCGCG GTAGTTTGAG TGTGGATGTG
CGCACCAATA CGCTGGTTGC GCACCAGCCT GAGGACCGGC TTGCCGAGTT GCGCCAGTTG
GTTGCGCAAC TGGATGTGCC GGTACGACAG GTAGAGATCG AGGCGCGCAT CGTGGAGGCC
AATGTCGATT ACGAGAACAG CCTTGGGGTG CGCTGGGGCC CTCGCCTCTA CAGCGAAGCC
CCTGCTTTGG GCAAGGACGT GTTTGTTGAT CTTGGCATGG AGCGGGCCGG CTCCAGCATC
GGCTTTGGAG TGTTGCGTGG GGGCGTGCTG TTGGACCTTG AACTCAGCGC CATGGAGAAG
ACCGGCAATG GTGAAATCAT TTCCCAGCCC AAGGTGGTCA CCGCTAACAA CGAAACTGCC
CGCATCCTCA AAGGTACCGA AGTCCCTTAC CAGGAGACCA CGAAGAGTGG CGCTACGTCG
GTTACATTCC GCGAGGCGTC GCTGTCGTTG GAGGTCACTC CGCAGATCAC GCCGGACGGC
AAGGTGATCA TGACGGTCAA GGTGACCAAG GACGAGCCTG ATTTCGTCAA TGCCTTGAAC
GATGTGCCGC CGATCCGCAA GAACGAGGTC AATGCCAAGG TACGGGTAGC TGACGGGGAA
ACCATCGTCA TTGGCGGTGT GTATTCGACT ACGCAAAACA ATGTGGTGGA CAAGGTGCCA
TTTTTCGGCG ATCTGCCGTA TGTTGGGCGG CTGTTTCGAC GCGATGCATT ACAAGAGAAA
AAATCCGAGC TGCTGGTCTT CCTGACTCCG CGTATCATGA ATGACCAGGC GATTGCTGTG
AGTCGTTGA
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| Protein sequence | MNGLMKWLVA ALLPMPLLAA TPYRGEPISL NFQDVEVRLV LQVLADYAGI NLVASDTVQG
SITLRLQDVP WDQALELVLR SKGLGRREEG NVLLVAPAVE LAEQALGARM GLELEAQSRP
LRRELLPIHH AEASELAELL LATLADDGIL TGRGSLSVDV RTNTLVAHQP EDRLAELRQL
VAQLDVPVRQ VEIEARIVEA NVDYENSLGV RWGPRLYSEA PALGKDVFVD LGMERAGSSI
GFGVLRGGVL LDLELSAMEK TGNGEIISQP KVVTANNETA RILKGTEVPY QETTKSGATS
VTFREASLSL EVTPQITPDG KVIMTVKVTK DEPDFVNALN DVPPIRKNEV NAKVRVADGE
TIVIGGVYST TQNNVVDKVP FFGDLPYVGR LFRRDALQEK KSELLVFLTP RIMNDQAIAV
SR
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