Gene PputW619_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0378 
SymbolrpmE 
ID6109158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp395573 
End bp395788 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content55% 
IMG OID641620135 
Product50S ribosomal protein L31 
Protein accessionYP_001747253 
Protein GI170719565 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0254] Ribosomal protein L31 
TIGRFAM ID[TIGR00105] ribosomal protein L31 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTG ATATTCATCC GAACTACGAA GCAGTTGCTG TGACCTGCAG CTGCGGCAAC 
AAATTCGAAA CCCGTTCGAC CCTGGGCAGC ACCCTGGCGA TCGACGTTTG CAACCTGTGC
CACCCGTTCT ACACCGGTAA GCAGAAAGTG CTGGACACCG GTGGTCGCGT TCAGCGCTTC
GCCGATCGCT TCGGTATGTT CGGTACCAAG AAGTAA
 
Protein sequence
MKADIHPNYE AVAVTCSCGN KFETRSTLGS TLAIDVCNLC HPFYTGKQKV LDTGGRVQRF 
ADRFGMFGTK K