Gene PputW619_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0373 
Symbol 
ID6109153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp389318 
End bp389944 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID641620130 
ProductNLP/P60 protein 
Protein accessionYP_001747248 
Protein GI170719560 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCTT TGTTAAAGAC ATGGCTGACC CTCTGCCTAT TATTGCCCCT GGCCGCCCAC 
GCCACCAACC GTGAGCAACG TCTTCCCAAT GGTTTCACCG GCTATACCAC CAATGCCACG
GTGAAACACG CGCCGAGCAA GCACACCGCG ATGCGTGCAC GCGCCAATAA CGCTGGTCAG
GTTCATAACC TGCCGGTCGC CGCCATGTCG CCGAAACAGA GCAGCGATGT GCTAAGCCGC
GCCGTGAACG TGCTCGGTAC CCCTTATGTT TGGGGCGGCA GCAGCCCTAA AAAAGGCTTC
GACTGCAGCG GGCTGGTCAA GTACGCCTTC AACGATGTGG CTGATGTCGA CTTGCCGCGC
ACCTCCAATG CCATGGCCCA GGGCCACGGC GTGAAGGTGG CTAAAAGCGA TCTGAAGCCT
GGCGACCTGA TCTTCTTCAA CATCAAGAGC CGGCGCGTCA ACCACGTAGC CATCTACCTG
GGCAACGATC GCTTCATCCA CGCACCGCGC CGCGGCAAGC GGGTGAGCAT CGACAACCTG
AGCAAACCTT ACTGGCAGAA GCACTATGTC GTGGCCAAGC GGGTGTTGCC GAAGGCGCCG
CAGCAGTTGG CCCTGGCCAA GCGCTAA
 
Protein sequence
MPPLLKTWLT LCLLLPLAAH ATNREQRLPN GFTGYTTNAT VKHAPSKHTA MRARANNAGQ 
VHNLPVAAMS PKQSSDVLSR AVNVLGTPYV WGGSSPKKGF DCSGLVKYAF NDVADVDLPR
TSNAMAQGHG VKVAKSDLKP GDLIFFNIKS RRVNHVAIYL GNDRFIHAPR RGKRVSIDNL
SKPYWQKHYV VAKRVLPKAP QQLALAKR