| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0340 |
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| Symbol | |
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| ID | 6109120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 359498 |
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| End bp | 360310 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620097 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001747215 |
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| Protein GI | 170719527 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAT TACCCGAAGT AGAGACCACG CGGCGTGGTA TCGCGCCGCA CCTGGAAGGC
CAGCGGGTCA GCCGCGTGGT GGTGAGAGAC CGGCGCTTGC GCTGGCCAAT CCCGGAGGAC
CTGGACGTGC GTTTGTCCGG GCAGCGTATT CTCAGCGTCG AGCGGCGCGC CAAATACCTG
CTGATCAATG CCGAGGTCGG CACCTTGATC AGCCATCTGG GCATGTCGGG CAACCTGCGT
CTGGTGCAGC TGGGGCTACC GGCGGCCAAG CATGAGCACG TCGATATCGA ACTGGAGTCG
GGGCTGATGC TGCGCTACAC CGACCCACGT CGTTTCGGTG CCATGCTCTG GAGCCTTGAT
CCGCTCAATC ACGAGCTGCT CCTGCGTCTG GGCCCAGAGC CGTTGACCGA CCTGTTCGAC
GGCGAGCGCC TGTTTCAGCT GTCGCGTGGG CGGACGATGG CCGTCAAGCC TTTCATCATG
GATAACGCGG TGGTGGTGGG CGTGGGCAAT ATCTACGCGA CCGAGGCGCT GTTTGCCGCC
GGTATCGACC CACGCCGTGA GGCGGGCGGA ATCTCCCGTA CCCGTTACCT GAAACTGGCC
ATCGAGATCA AGCGCGTGCT GGCGGCAGCC ATCGAGCAAG GGGGCACGAC CTTGCGCGAT
TTCATTGGCG GCGACGGACA GCCGGGTTAT TTCCAGCAGG AACTATTCGT GTACGGCCGG
GGCGGGATGC CTTGCAAGCT GTGCGGCACT ACCTTGCGTG AGGCCAAGCT TGGGCAGCGG
GCCAGCGTTT ACTGCCCGCG TTGCCAGCGT TGA
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| Protein sequence | MPELPEVETT RRGIAPHLEG QRVSRVVVRD RRLRWPIPED LDVRLSGQRI LSVERRAKYL
LINAEVGTLI SHLGMSGNLR LVQLGLPAAK HEHVDIELES GLMLRYTDPR RFGAMLWSLD
PLNHELLLRL GPEPLTDLFD GERLFQLSRG RTMAVKPFIM DNAVVVGVGN IYATEALFAA
GIDPRREAGG ISRTRYLKLA IEIKRVLAAA IEQGGTTLRD FIGGDGQPGY FQQELFVYGR
GGMPCKLCGT TLREAKLGQR ASVYCPRCQR
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