| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0316 |
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| Symbol | |
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| ID | 6109096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 330321 |
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| End bp | 331835 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620073 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001747191 |
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| Protein GI | 170719503 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.167113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAC AGTACGTCAA GAAGATCCTC ACCTCGCGCG TCTACGACGT CGCTGTCGAA
ACCCCGCTGC ACAGCGCCGG GCAACTGAGC AAGCGCCTGG GCAACCAGAT TTTGCTCAAG
CGTGAAGACC TGCAGCCGGT GTTCTCCTTC AAGATCCGTG GGGCTTACAA CAAGCTGGCG
CAACTGAGCC CGGAAGAACT GGCGCGCGGC GTGGTCACCG CCTCGGCCGG CAACCATGCA
CAGGGGCTGG CCCTGGCAGC CCGCGAGCTG GGCATCAAGG CCACCATCGT GATGCCCAAG
ACCACCCCGG AGATCAAGAT CGAAGGCGTA CGCTCGCGTG GCGGCAAGGT GGTACTGCAT
GGCGACTCGT TCCCCGAGGC GCTGGCCTAC TCGCTGAAAC TGGTCGATGA AAAGGGCTTC
GTCTATATCC ATCCTTATGA CGACCCGCAC ACCATTGCCG GGCAAGGCAC CGTGGCAATG
GAAATCCTGC GCCAGCACCC TGGCCGGCTG GATGCTATCT TCGTGCCGGT GGGCGGCGGT
GGGCTGATCG CCGGCATCGC CGCCTACGTT AAATACCTTC GCCCTGAAAT CAAGGTGATT
GGCGTCGAGC CGGATGACTC CAATTGCCTG CAAGCGGCCA TGGCCGCCGG GGAGCGCGTG
GTGCTGCCGC AGGTCGGGCT GTTTGCCGAT GGCGTGGCCG TGGCGCAGAT CGGCCAGCAT
ACCTTCGACA TCTGCCGCTT GCATGTGGAT GAAGTGGTTA CCGTCAGTAC TGACGAGATC
TGCGCAGCAA TCAAGGATAT CTACGACGAT ACACGCTCTA TCACCGAGCC TGCAGGCGCC
TTGGGTGTTG CTGGGATCAA GAAGTATGTG GAGCTCAACG GTGTAACCGG GCAAACGCTG
GTGGCCATTG ACTCGGGTGC CAACGTCAAC TTCGACCGCC TGCGTCACGT CGCCGAGCGT
GCCGAGCTGG GCGAGAAACG CGAAGCGATT ATCGCCGTGA CCATTCCCGA GCGCCCGGGC
AGCTTCAAGG CGTTCTGCGA GGCCATCGGC AAGCGCCAGA TCACCGAATT CAACTACCGC
AAGCACACAT CTGACGAAGC CCATATCTTC GTTGGCGTGC AGACCCATCC GGAGAACGAC
CCGCGCGCTG CGTTGGTGCA GCAACTGACT GAGCAGGGCT TCCCGGTCAC CGACCTTACT
GACAACGAAC TGGCCAAGAT GCACATCCGC CACATGGTGG GTGGCCATTC GGCCGGCGCC
CGCGACGAGA TTGTGCTGCG CTTCGAATTC CCTGAGCGGC CTGGGGCGCT GTTCAACTTC
CTCAACAAGC TGGGCGGGCG CTGGAACATC TCGATGTTCC ACTACCGCAA CCACGGTGCT
GCCGATGGGC GTGTGGTGGC GGGGTTGCAG GTGCCTGAGG ACGAGCGCCA CCTGGTGCCG
GCGGCGCTGG CCAAGATCGG ATATCCGTAC TGGGATGAGA CAGACAATCC GGCTTACCGG
CTGTTCCTGG GTTGA
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| Protein sequence | MLEQYVKKIL TSRVYDVAVE TPLHSAGQLS KRLGNQILLK REDLQPVFSF KIRGAYNKLA
QLSPEELARG VVTASAGNHA QGLALAAREL GIKATIVMPK TTPEIKIEGV RSRGGKVVLH
GDSFPEALAY SLKLVDEKGF VYIHPYDDPH TIAGQGTVAM EILRQHPGRL DAIFVPVGGG
GLIAGIAAYV KYLRPEIKVI GVEPDDSNCL QAAMAAGERV VLPQVGLFAD GVAVAQIGQH
TFDICRLHVD EVVTVSTDEI CAAIKDIYDD TRSITEPAGA LGVAGIKKYV ELNGVTGQTL
VAIDSGANVN FDRLRHVAER AELGEKREAI IAVTIPERPG SFKAFCEAIG KRQITEFNYR
KHTSDEAHIF VGVQTHPEND PRAALVQQLT EQGFPVTDLT DNELAKMHIR HMVGGHSAGA
RDEIVLRFEF PERPGALFNF LNKLGGRWNI SMFHYRNHGA ADGRVVAGLQ VPEDERHLVP
AALAKIGYPY WDETDNPAYR LFLG
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