| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0315 |
|---|
| Symbol | |
|---|
| ID | 6109095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 329513 |
|---|
| End bp | 330187 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641620072 |
|---|
| Product | ribose-5-phosphate isomerase A |
|---|
| Protein accession | YP_001747190 |
|---|
| Protein GI | 170719502 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.171962 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG ACCAACTCAA ACAGGCCGTC GCCCAGGCCG CTGTCGACTT CATTCTGCCC
AAGCTGGATG AAAAGAGCGT CGTCGGCGTC GGCACCGGTT CGACTGCCAA TTTCTTCATT
GACGCCTTGG CCCAGCACAA GACGGCGTTC GACGGCGCGG TCGCCAGCTC CGAGGCCACT
GCACAGCGTC TGAAGGGCCA TGGCATCCCG GTCTATGAGC TGAACAGCGT CAGCGAGCTG
GAGTTCTACG TCGACGGCGC CGACGAGAGC GACGCACACC TGAACCTGAT CAAAGGCGGT
GGCGCGGCAC TGACGCGGGA GAAAATCGTC GCGGCCGTGG CCAAGACCTT CATTTGCATC
GCCGATGCCA GCAAGCTGGT GCCGGTGCTG GGCGCCTTCC CGCTGCCGGT CGAGGTCATC
CCGATGGCCC GCAGCCACGT GGCGCGCCAA CTGGTCAAGC TGGGCGGAGA CCCGGTGTAC
CGTGAGGGTG TGGTCACCGA TAACGGCAAC GTGATCCTGG ATGTGTACAA CCTGCAGATC
ACCAACCCCG TGGAGCTGGA AGCGCAGATC AATGCGATCG TCGGCGTGGT GACCAATGGC
CTGTTTGCCG CACGGCCGGC AGACTTGCTG TTGCTGGGCA CCCCGGAAGG CGTGAAGAGC
CTGAAAGCCG AGTGA
|
|---|
| Protein sequence | MTQDQLKQAV AQAAVDFILP KLDEKSVVGV GTGSTANFFI DALAQHKTAF DGAVASSEAT
AQRLKGHGIP VYELNSVSEL EFYVDGADES DAHLNLIKGG GAALTREKIV AAVAKTFICI
ADASKLVPVL GAFPLPVEVI PMARSHVARQ LVKLGGDPVY REGVVTDNGN VILDVYNLQI
TNPVELEAQI NAIVGVVTNG LFAARPADLL LLGTPEGVKS LKAE
|
|---|
| |