| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0245 |
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| Symbol | |
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| ID | 6109024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 258748 |
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| End bp | 259995 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620001 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001747120 |
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| Protein GI | 170719432 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.377243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.537295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTT TCAATTACCG CGACGGTGGA CTGTTCGCGG AGGGCGTGGC CCTGTCGGCC
ATCGCCGAAC GTTTCGGCAC CCCCACCTAC GTGTACTCGC GCGCCCACAT CGAGGCCCAG
TACCGCAGCT ATACCGATGC CCTGCAAGGT GTCGAGCACC TGGTGTGCTT CGCGGTCAAG
GCCAACTCCA ACCTTGGTGT GCTGAACGTT CTGGCCCGCA TGGGCGCAGG CTTCGACATC
GTTTCCGGCG GTGAGCTGGA GCGGGTACTG GCCGCCGGTG GGCGGGCTGA CCGTGTGGTG
TTCTCCGGCG TCGGCAAGAC CCGCGAAGAC ATGCGGCGCG CGTTGGAAGT CGGCGTTCAT
TGCTTCAACG TCGAATCCAC CGACGAACTG GAGCGCCTGC AGGTGGTTGC CGCCGAGATG
GGCAAGGTTG CCCCGGTCTC GCTGCGGGTC AACCCGGACG TCGATGCCGG CACCCACCCT
TACATTTCCA CCGGCCTCAA AGAGAATAAG TTCGGCATCG CCATCGCCGA CGCCGAAGCC
ATCTACGTGC GTGCCGCGCA GCTGCCAAAC CTGGAAGTGG TCGGTGTCGA CTGCCACATC
GGCTCGCAGC TGACCACCGT AGAGCCATTC CTCGACGCGC TCGACCGCCT GCTGGACCTG
GTCGACCGCT TGGCCGATTG CGGCATCCAC CTGCGCCATC TGGACCTGGG CGGCGGTGTT
GGCGTGCGCT ATCGCGACGA AGAGCCGCCA CTGGTAGCCG ATTACATCAA GGCCATCCGC
GAGCGCGTCG GCGACCGTGA CCTGGCCCTG GTGTTCGAGC CGGGCCGCTA CATCGTGGCC
AACGCCGGTG CCCTGCTGAC CCGCGTGGAA TACCTCAAGC ACACCGAACA CAAAGACTTC
GCCATCATTG ATGCGGCGAT GAACGACCTG ATCCGTCCAG CCCTGTACCA GGCCTGGATG
GGCGTTAGCG CGGTCACCCC ACGTGAGGGC GAAGGGCGTG CCTACGACCT GGTCGGGCCA
ATCTGCGAAA CCGGCGACTT CCTCGCCAAG GACCGCCAGC TGAACCTGGC CGAAGGTGAC
CTGCTGGCTG TGCAGTCTGC GGGCGCCTAT GGTTTCGTCA TGAGCTCGAA CTACAACACC
CGTGGCCGTT GTGCGGAAAT CCTGGTCGAC GGCGATCAGG CTTTCGAAGT CCGCCGTCGC
GAGACCATTG CCGAACTGTA CGCTGGCGAA AGCCTGCTGC CGGAGTGA
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| Protein sequence | MNAFNYRDGG LFAEGVALSA IAERFGTPTY VYSRAHIEAQ YRSYTDALQG VEHLVCFAVK
ANSNLGVLNV LARMGAGFDI VSGGELERVL AAGGRADRVV FSGVGKTRED MRRALEVGVH
CFNVESTDEL ERLQVVAAEM GKVAPVSLRV NPDVDAGTHP YISTGLKENK FGIAIADAEA
IYVRAAQLPN LEVVGVDCHI GSQLTTVEPF LDALDRLLDL VDRLADCGIH LRHLDLGGGV
GVRYRDEEPP LVADYIKAIR ERVGDRDLAL VFEPGRYIVA NAGALLTRVE YLKHTEHKDF
AIIDAAMNDL IRPALYQAWM GVSAVTPREG EGRAYDLVGP ICETGDFLAK DRQLNLAEGD
LLAVQSAGAY GFVMSSNYNT RGRCAEILVD GDQAFEVRRR ETIAELYAGE SLLPE
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