Gene PputW619_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0238 
Symbol 
ID6109017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp253038 
End bp253376 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content57% 
IMG OID641619994 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001747113 
Protein GI170719425 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0928138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.898368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAG TCACAGCCAT CATCAAGCCG TTCAAGCTGG ACGACGTGCG AGAGTCACTG 
TCGGAAATCG GCGTGCAGGG CATCACCGTC ACCGAAGTCA AAGGCTTCGG TCGGCAGAAG
GGTCACACCG AGTTGTATCG CGGTGCGGAA TATGTGGTCG ACTTCCTGCC CAAGGTGAAG
ATCGACGTCG CCATCGACGA CAAGGACCTC GATCGAGTGA TCGAAGCCAT CACCAAGGCT
GCCAACACCG GCAAGATCGG TGACGGCAAG ATCTTCGTGG TGAATCTGGA GCAGGCAATC
CGCATCCGTA CCGGCGAAAC CGATACCGAC GCGATCTAA
 
Protein sequence
MKLVTAIIKP FKLDDVRESL SEIGVQGITV TEVKGFGRQK GHTELYRGAE YVVDFLPKVK 
IDVAIDDKDL DRVIEAITKA ANTGKIGDGK IFVVNLEQAI RIRTGETDTD AI